Protein–RNA interactions for Protein: Q8K2F3

Depp1, Protein DEPP1, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depp1Q8K2F3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Depp1Q8K2F3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Depp1Q8K2F3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Depp1Q8K2F3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Depp1Q8K2F3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Depp1Q8K2F3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Depp1Q8K2F3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Depp1Q8K2F3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Depp1Q8K2F3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Depp1Q8K2F3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Depp1Q8K2F3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Depp1Q8K2F3 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.6■□□□□ 0.73
Depp1Q8K2F3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.6■□□□□ 0.73
Depp1Q8K2F3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Depp1Q8K2F3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Depp1Q8K2F3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.59■□□□□ 0.73
Depp1Q8K2F3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Depp1Q8K2F3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Depp1Q8K2F3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Depp1Q8K2F3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Depp1Q8K2F3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.58■□□□□ 0.72
Depp1Q8K2F3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Depp1Q8K2F3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Depp1Q8K2F3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Depp1Q8K2F3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Depp1Q8K2F3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Depp1Q8K2F3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Depp1Q8K2F3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Depp1Q8K2F3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Depp1Q8K2F3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Depp1Q8K2F3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.55■□□□□ 0.72
Depp1Q8K2F3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Depp1Q8K2F3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Depp1Q8K2F3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Depp1Q8K2F3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Depp1Q8K2F3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Depp1Q8K2F3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Depp1Q8K2F3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Depp1Q8K2F3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Depp1Q8K2F3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Depp1Q8K2F3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Depp1Q8K2F3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Depp1Q8K2F3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Depp1Q8K2F3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Depp1Q8K2F3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Depp1Q8K2F3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Depp1Q8K2F3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.52■□□□□ 0.71
Depp1Q8K2F3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Depp1Q8K2F3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Depp1Q8K2F3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Depp1Q8K2F3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Depp1Q8K2F3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depp1Q8K2F3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Depp1Q8K2F3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Depp1Q8K2F3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.5■□□□□ 0.71
Depp1Q8K2F3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Depp1Q8K2F3 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.49■□□□□ 0.71
Depp1Q8K2F3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Depp1Q8K2F3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Depp1Q8K2F3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Depp1Q8K2F3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Depp1Q8K2F3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Depp1Q8K2F3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Depp1Q8K2F3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.48■□□□□ 0.71
Depp1Q8K2F3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depp1Q8K2F3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depp1Q8K2F3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Depp1Q8K2F3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Depp1Q8K2F3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.47■□□□□ 0.71
Depp1Q8K2F3 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Depp1Q8K2F3 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.46■□□□□ 0.71
Depp1Q8K2F3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.46■□□□□ 0.71
Depp1Q8K2F3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Depp1Q8K2F3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Depp1Q8K2F3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Depp1Q8K2F3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Depp1Q8K2F3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.45■□□□□ 0.7
Depp1Q8K2F3 Gm37136-201ENSMUST00000194368 194 ntBASIC19.45■□□□□ 0.7
Depp1Q8K2F3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.44■□□□□ 0.7
Depp1Q8K2F3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.44■□□□□ 0.7
Depp1Q8K2F3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Depp1Q8K2F3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Depp1Q8K2F3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.44■□□□□ 0.7
Depp1Q8K2F3 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.44■□□□□ 0.7
Depp1Q8K2F3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Depp1Q8K2F3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Depp1Q8K2F3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.43■□□□□ 0.7
Depp1Q8K2F3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.43■□□□□ 0.7
Depp1Q8K2F3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.43■□□□□ 0.7
Depp1Q8K2F3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Depp1Q8K2F3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Depp1Q8K2F3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Depp1Q8K2F3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Depp1Q8K2F3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Depp1Q8K2F3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Depp1Q8K2F3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Depp1Q8K2F3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Depp1Q8K2F3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Depp1Q8K2F3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Depp1Q8K2F3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms