Protein–RNA interactions for Protein: Q8C5N3

Cwc22, Pre-mRNA-splicing factor CWC22 homolog, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cwc22Q8C5N3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC32.01■■■□□ 2.71
Cwc22Q8C5N3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.71
Cwc22Q8C5N3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.71
Cwc22Q8C5N3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Cwc22Q8C5N3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC32■■■□□ 2.71
Cwc22Q8C5N3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
Cwc22Q8C5N3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC31.97■■■□□ 2.71
Cwc22Q8C5N3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC31.97■■■□□ 2.71
Cwc22Q8C5N3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC31.97■■■□□ 2.71
Cwc22Q8C5N3 Gm9812-201ENSMUST00000061934 968 ntBASIC31.96■■■□□ 2.71
Cwc22Q8C5N3 Gm12818-201ENSMUST00000117562 1349 ntBASIC31.96■■■□□ 2.71
Cwc22Q8C5N3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
Cwc22Q8C5N3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Cwc22Q8C5N3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
Cwc22Q8C5N3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
Cwc22Q8C5N3 Gm45364-201ENSMUST00000210883 159 ntBASIC31.93■■■□□ 2.7
Cwc22Q8C5N3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Cwc22Q8C5N3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Cwc22Q8C5N3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
Cwc22Q8C5N3 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.91■■■□□ 2.7
Cwc22Q8C5N3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Cwc22Q8C5N3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Cwc22Q8C5N3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC31.9■■■□□ 2.7
Cwc22Q8C5N3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Cwc22Q8C5N3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Cwc22Q8C5N3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Cwc22Q8C5N3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Cwc22Q8C5N3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC31.88■■■□□ 2.69
Cwc22Q8C5N3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Cwc22Q8C5N3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Cwc22Q8C5N3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Cwc22Q8C5N3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Cwc22Q8C5N3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Cwc22Q8C5N3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Cwc22Q8C5N3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
Cwc22Q8C5N3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Cwc22Q8C5N3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
Cwc22Q8C5N3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Cwc22Q8C5N3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
Cwc22Q8C5N3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
Cwc22Q8C5N3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Cwc22Q8C5N3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Cwc22Q8C5N3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC31.84■■■□□ 2.69
Cwc22Q8C5N3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC31.84■■■□□ 2.69
Cwc22Q8C5N3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC31.84■■■□□ 2.69
Cwc22Q8C5N3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
Cwc22Q8C5N3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Cwc22Q8C5N3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC31.83■■■□□ 2.69
Cwc22Q8C5N3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
Cwc22Q8C5N3 Gm6311-201ENSMUST00000073790 878 ntBASIC31.82■■■□□ 2.68
Cwc22Q8C5N3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Cwc22Q8C5N3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Cwc22Q8C5N3 Pkd1-207ENSMUST00000228550 1050 ntBASIC31.8■■■□□ 2.68
Cwc22Q8C5N3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Cwc22Q8C5N3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
Cwc22Q8C5N3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Cwc22Q8C5N3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Cwc22Q8C5N3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Cwc22Q8C5N3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
Cwc22Q8C5N3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Cwc22Q8C5N3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
Cwc22Q8C5N3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Cwc22Q8C5N3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Cwc22Q8C5N3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC31.78■■■□□ 2.68
Cwc22Q8C5N3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Cwc22Q8C5N3 AC153911.1-201ENSMUST00000220378 758 ntBASIC31.77■■■□□ 2.68
Cwc22Q8C5N3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
Cwc22Q8C5N3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC31.76■■■□□ 2.68
Cwc22Q8C5N3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Cwc22Q8C5N3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Cwc22Q8C5N3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Cwc22Q8C5N3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Cwc22Q8C5N3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Cwc22Q8C5N3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Cwc22Q8C5N3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC31.74■■■□□ 2.67
Cwc22Q8C5N3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Cwc22Q8C5N3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Cwc22Q8C5N3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC31.74■■■□□ 2.67
Cwc22Q8C5N3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Cwc22Q8C5N3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC31.72■■■□□ 2.67
Cwc22Q8C5N3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
Cwc22Q8C5N3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Cwc22Q8C5N3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Cwc22Q8C5N3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Cwc22Q8C5N3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Cwc22Q8C5N3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC31.7■■■□□ 2.67
Cwc22Q8C5N3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Cwc22Q8C5N3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Cwc22Q8C5N3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Cwc22Q8C5N3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC31.67■■■□□ 2.66
Cwc22Q8C5N3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC31.66■■■□□ 2.66
Cwc22Q8C5N3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Cwc22Q8C5N3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
Cwc22Q8C5N3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Cwc22Q8C5N3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Cwc22Q8C5N3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Cwc22Q8C5N3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC31.64■■■□□ 2.66
Cwc22Q8C5N3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Cwc22Q8C5N3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC31.64■■■□□ 2.66
Cwc22Q8C5N3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms