Protein–RNA interactions for Protein: Q8BRH0

Tmtc3, Transmembrane and TPR repeat-containing protein 3, mousemouse

Predictions only

Length 920 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmtc3Q8BRH0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Tmtc3Q8BRH0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tmtc3Q8BRH0 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.28■■□□□ 1.32
Tmtc3Q8BRH0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Tmtc3Q8BRH0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Tmtc3Q8BRH0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.27■■□□□ 1.32
Tmtc3Q8BRH0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Tmtc3Q8BRH0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Tmtc3Q8BRH0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.31
Tmtc3Q8BRH0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.31
Tmtc3Q8BRH0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Tmtc3Q8BRH0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.26■■□□□ 1.31
Tmtc3Q8BRH0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tmtc3Q8BRH0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Tmtc3Q8BRH0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tmtc3Q8BRH0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tmtc3Q8BRH0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Tmtc3Q8BRH0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Tmtc3Q8BRH0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.23■■□□□ 1.31
Tmtc3Q8BRH0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tmtc3Q8BRH0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Tmtc3Q8BRH0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.23■■□□□ 1.31
Tmtc3Q8BRH0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Tmtc3Q8BRH0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Tmtc3Q8BRH0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Tmtc3Q8BRH0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Tmtc3Q8BRH0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tmtc3Q8BRH0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tmtc3Q8BRH0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tmtc3Q8BRH0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Tmtc3Q8BRH0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tmtc3Q8BRH0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tmtc3Q8BRH0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Tmtc3Q8BRH0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tmtc3Q8BRH0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tmtc3Q8BRH0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tmtc3Q8BRH0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tmtc3Q8BRH0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.17■■□□□ 1.3
Tmtc3Q8BRH0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tmtc3Q8BRH0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Tmtc3Q8BRH0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tmtc3Q8BRH0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tmtc3Q8BRH0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tmtc3Q8BRH0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Tmtc3Q8BRH0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tmtc3Q8BRH0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Tmtc3Q8BRH0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tmtc3Q8BRH0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.15■■□□□ 1.3
Tmtc3Q8BRH0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tmtc3Q8BRH0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Tmtc3Q8BRH0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.14■■□□□ 1.29
Tmtc3Q8BRH0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.14■■□□□ 1.29
Tmtc3Q8BRH0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tmtc3Q8BRH0 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.13■■□□□ 1.29
Tmtc3Q8BRH0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tmtc3Q8BRH0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tmtc3Q8BRH0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Tmtc3Q8BRH0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.12■■□□□ 1.29
Tmtc3Q8BRH0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tmtc3Q8BRH0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tmtc3Q8BRH0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tmtc3Q8BRH0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tmtc3Q8BRH0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.11■■□□□ 1.29
Tmtc3Q8BRH0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tmtc3Q8BRH0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tmtc3Q8BRH0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.11■■□□□ 1.29
Tmtc3Q8BRH0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tmtc3Q8BRH0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tmtc3Q8BRH0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Tmtc3Q8BRH0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Tmtc3Q8BRH0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tmtc3Q8BRH0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tmtc3Q8BRH0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tmtc3Q8BRH0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.1■■□□□ 1.29
Tmtc3Q8BRH0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Tmtc3Q8BRH0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tmtc3Q8BRH0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.09■■□□□ 1.29
Tmtc3Q8BRH0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tmtc3Q8BRH0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tmtc3Q8BRH0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tmtc3Q8BRH0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tmtc3Q8BRH0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tmtc3Q8BRH0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Tmtc3Q8BRH0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tmtc3Q8BRH0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Tmtc3Q8BRH0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tmtc3Q8BRH0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Tmtc3Q8BRH0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tmtc3Q8BRH0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.07■■□□□ 1.28
Tmtc3Q8BRH0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Tmtc3Q8BRH0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tmtc3Q8BRH0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tmtc3Q8BRH0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tmtc3Q8BRH0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Tmtc3Q8BRH0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Tmtc3Q8BRH0 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.05■■□□□ 1.28
Tmtc3Q8BRH0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Tmtc3Q8BRH0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Tmtc3Q8BRH0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tmtc3Q8BRH0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms