Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
VmacQ8BP01 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.69■■□□□ 1.86
VmacQ8BP01 Gm4799-201ENSMUST00000095396 657 ntBASIC26.69■■□□□ 1.86
VmacQ8BP01 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
VmacQ8BP01 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.68■■□□□ 1.86
VmacQ8BP01 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.68■■□□□ 1.86
VmacQ8BP01 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
VmacQ8BP01 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
VmacQ8BP01 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.68■■□□□ 1.86
VmacQ8BP01 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
VmacQ8BP01 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
VmacQ8BP01 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.67■■□□□ 1.86
VmacQ8BP01 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
VmacQ8BP01 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC26.66■■□□□ 1.86
VmacQ8BP01 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
VmacQ8BP01 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
VmacQ8BP01 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.65■■□□□ 1.86
VmacQ8BP01 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
VmacQ8BP01 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
VmacQ8BP01 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
VmacQ8BP01 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
VmacQ8BP01 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
VmacQ8BP01 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
VmacQ8BP01 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.64■■□□□ 1.86
VmacQ8BP01 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
VmacQ8BP01 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
VmacQ8BP01 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
VmacQ8BP01 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
VmacQ8BP01 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
VmacQ8BP01 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
VmacQ8BP01 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.61■■□□□ 1.85
VmacQ8BP01 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
VmacQ8BP01 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
VmacQ8BP01 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
VmacQ8BP01 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
VmacQ8BP01 Mir3960-201ENSMUST00000198213 73 ntBASIC26.6■■□□□ 1.85
VmacQ8BP01 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.6■■□□□ 1.85
VmacQ8BP01 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
VmacQ8BP01 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
VmacQ8BP01 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
VmacQ8BP01 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
VmacQ8BP01 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
VmacQ8BP01 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
VmacQ8BP01 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
VmacQ8BP01 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
VmacQ8BP01 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.58■■□□□ 1.85
VmacQ8BP01 Gm9812-201ENSMUST00000061934 968 ntBASIC26.58■■□□□ 1.85
VmacQ8BP01 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
VmacQ8BP01 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
VmacQ8BP01 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
VmacQ8BP01 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
VmacQ8BP01 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
VmacQ8BP01 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.56■■□□□ 1.84
VmacQ8BP01 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
VmacQ8BP01 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
VmacQ8BP01 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
VmacQ8BP01 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.55■■□□□ 1.84
VmacQ8BP01 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
VmacQ8BP01 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
VmacQ8BP01 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.54■■□□□ 1.84
VmacQ8BP01 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
VmacQ8BP01 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VmacQ8BP01 Gm45364-201ENSMUST00000210883 159 ntBASIC26.53■■□□□ 1.84
VmacQ8BP01 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
VmacQ8BP01 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
VmacQ8BP01 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
VmacQ8BP01 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.52■■□□□ 1.84
VmacQ8BP01 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
VmacQ8BP01 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.51■■□□□ 1.83
VmacQ8BP01 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
VmacQ8BP01 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.49■■□□□ 1.83
VmacQ8BP01 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
VmacQ8BP01 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
VmacQ8BP01 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
VmacQ8BP01 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VmacQ8BP01 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VmacQ8BP01 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
VmacQ8BP01 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
VmacQ8BP01 AC153911.1-201ENSMUST00000220378 758 ntBASIC26.47■■□□□ 1.83
VmacQ8BP01 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.47■■□□□ 1.83
VmacQ8BP01 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
VmacQ8BP01 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
VmacQ8BP01 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VmacQ8BP01 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
VmacQ8BP01 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
VmacQ8BP01 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
VmacQ8BP01 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
VmacQ8BP01 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
VmacQ8BP01 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.44■■□□□ 1.82
VmacQ8BP01 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VmacQ8BP01 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.43■■□□□ 1.82
VmacQ8BP01 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
VmacQ8BP01 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
VmacQ8BP01 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
VmacQ8BP01 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
VmacQ8BP01 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VmacQ8BP01 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
VmacQ8BP01 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
VmacQ8BP01 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VmacQ8BP01 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms