Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Srrm4Q8BKA3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Srrm4Q8BKA3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Srrm4Q8BKA3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Srrm4Q8BKA3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Srrm4Q8BKA3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Srrm4Q8BKA3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Srrm4Q8BKA3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Srrm4Q8BKA3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Srrm4Q8BKA3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.83■□□□□ 0.77
Srrm4Q8BKA3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Srrm4Q8BKA3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Srrm4Q8BKA3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.83■□□□□ 0.77
Srrm4Q8BKA3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Srrm4Q8BKA3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Srrm4Q8BKA3 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.83■□□□□ 0.76
Srrm4Q8BKA3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Srrm4Q8BKA3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.82■□□□□ 0.76
Srrm4Q8BKA3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Srrm4Q8BKA3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.81■□□□□ 0.76
Srrm4Q8BKA3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Srrm4Q8BKA3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Srrm4Q8BKA3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Srrm4Q8BKA3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.8■□□□□ 0.76
Srrm4Q8BKA3 Gm4799-201ENSMUST00000095396 657 ntBASIC19.8■□□□□ 0.76
Srrm4Q8BKA3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Srrm4Q8BKA3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Srrm4Q8BKA3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Srrm4Q8BKA3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Srrm4Q8BKA3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Srrm4Q8BKA3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Srrm4Q8BKA3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.78■□□□□ 0.76
Srrm4Q8BKA3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Srrm4Q8BKA3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Srrm4Q8BKA3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Srrm4Q8BKA3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Srrm4Q8BKA3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Srrm4Q8BKA3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Srrm4Q8BKA3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Srrm4Q8BKA3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Srrm4Q8BKA3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Srrm4Q8BKA3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Srrm4Q8BKA3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Srrm4Q8BKA3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Srrm4Q8BKA3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Srrm4Q8BKA3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Srrm4Q8BKA3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Srrm4Q8BKA3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.75■□□□□ 0.75
Srrm4Q8BKA3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Srrm4Q8BKA3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Srrm4Q8BKA3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.74■□□□□ 0.75
Srrm4Q8BKA3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Srrm4Q8BKA3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.74■□□□□ 0.75
Srrm4Q8BKA3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Srrm4Q8BKA3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Srrm4Q8BKA3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Srrm4Q8BKA3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Srrm4Q8BKA3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Srrm4Q8BKA3 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.72■□□□□ 0.75
Srrm4Q8BKA3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.72■□□□□ 0.75
Srrm4Q8BKA3 Gm6311-201ENSMUST00000073790 878 ntBASIC19.72■□□□□ 0.75
Srrm4Q8BKA3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Srrm4Q8BKA3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.71■□□□□ 0.75
Srrm4Q8BKA3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Srrm4Q8BKA3 Mir3960-201ENSMUST00000198213 73 ntBASIC19.7■□□□□ 0.74
Srrm4Q8BKA3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Srrm4Q8BKA3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Srrm4Q8BKA3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Srrm4Q8BKA3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Srrm4Q8BKA3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Srrm4Q8BKA3 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.69■□□□□ 0.74
Srrm4Q8BKA3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Srrm4Q8BKA3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Srrm4Q8BKA3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Srrm4Q8BKA3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Srrm4Q8BKA3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Srrm4Q8BKA3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.68■□□□□ 0.74
Srrm4Q8BKA3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.68■□□□□ 0.74
Srrm4Q8BKA3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.68■□□□□ 0.74
Srrm4Q8BKA3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Srrm4Q8BKA3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Srrm4Q8BKA3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.67■□□□□ 0.74
Srrm4Q8BKA3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Srrm4Q8BKA3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Srrm4Q8BKA3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Srrm4Q8BKA3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Srrm4Q8BKA3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.66■□□□□ 0.74
Srrm4Q8BKA3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.66■□□□□ 0.74
Srrm4Q8BKA3 Gm45364-201ENSMUST00000210883 159 ntBASIC19.66■□□□□ 0.74
Srrm4Q8BKA3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Srrm4Q8BKA3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Srrm4Q8BKA3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Srrm4Q8BKA3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Srrm4Q8BKA3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Srrm4Q8BKA3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Srrm4Q8BKA3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Srrm4Q8BKA3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Srrm4Q8BKA3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Srrm4Q8BKA3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Srrm4Q8BKA3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms