Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hmbox1Q8BJA3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Hmbox1Q8BJA3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.3■■□□□ 1.16
Hmbox1Q8BJA3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hmbox1Q8BJA3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hmbox1Q8BJA3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hmbox1Q8BJA3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hmbox1Q8BJA3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hmbox1Q8BJA3 Gm16437-201ENSMUST00000025669 507 ntBASIC22.28■■□□□ 1.16
Hmbox1Q8BJA3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Hmbox1Q8BJA3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Hmbox1Q8BJA3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hmbox1Q8BJA3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hmbox1Q8BJA3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hmbox1Q8BJA3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hmbox1Q8BJA3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Hmbox1Q8BJA3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Hmbox1Q8BJA3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Hmbox1Q8BJA3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hmbox1Q8BJA3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Hmbox1Q8BJA3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hmbox1Q8BJA3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Hmbox1Q8BJA3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
Hmbox1Q8BJA3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.24■■□□□ 1.15
Hmbox1Q8BJA3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Hmbox1Q8BJA3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hmbox1Q8BJA3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.23■■□□□ 1.15
Hmbox1Q8BJA3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Hmbox1Q8BJA3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Hmbox1Q8BJA3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hmbox1Q8BJA3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Hmbox1Q8BJA3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hmbox1Q8BJA3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hmbox1Q8BJA3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Hmbox1Q8BJA3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hmbox1Q8BJA3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hmbox1Q8BJA3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hmbox1Q8BJA3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hmbox1Q8BJA3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Hmbox1Q8BJA3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Hmbox1Q8BJA3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.2■■□□□ 1.14
Hmbox1Q8BJA3 Particl-201ENSMUST00000205370 1560 ntBASIC22.2■■□□□ 1.14
Hmbox1Q8BJA3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Hmbox1Q8BJA3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Hmbox1Q8BJA3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Hmbox1Q8BJA3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hmbox1Q8BJA3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.19■■□□□ 1.14
Hmbox1Q8BJA3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hmbox1Q8BJA3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Hmbox1Q8BJA3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.18■■□□□ 1.14
Hmbox1Q8BJA3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hmbox1Q8BJA3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hmbox1Q8BJA3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Hmbox1Q8BJA3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hmbox1Q8BJA3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hmbox1Q8BJA3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hmbox1Q8BJA3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.16■■□□□ 1.14
Hmbox1Q8BJA3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hmbox1Q8BJA3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hmbox1Q8BJA3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Hmbox1Q8BJA3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.15■■□□□ 1.14
Hmbox1Q8BJA3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Hmbox1Q8BJA3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.14■■□□□ 1.13
Hmbox1Q8BJA3 Gm27502-201ENSMUST00000183495 199 ntBASIC22.14■■□□□ 1.13
Hmbox1Q8BJA3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Hmbox1Q8BJA3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hmbox1Q8BJA3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Hmbox1Q8BJA3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
Hmbox1Q8BJA3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Hmbox1Q8BJA3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hmbox1Q8BJA3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Hmbox1Q8BJA3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Hmbox1Q8BJA3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hmbox1Q8BJA3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Hmbox1Q8BJA3 Gm5812-201ENSMUST00000061073 957 ntBASIC22.1■■□□□ 1.13
Hmbox1Q8BJA3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Hmbox1Q8BJA3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.09■■□□□ 1.13
Hmbox1Q8BJA3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Hmbox1Q8BJA3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Hmbox1Q8BJA3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Hmbox1Q8BJA3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Hmbox1Q8BJA3 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.07■■□□□ 1.12
Hmbox1Q8BJA3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Hmbox1Q8BJA3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hmbox1Q8BJA3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hmbox1Q8BJA3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hmbox1Q8BJA3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hmbox1Q8BJA3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hmbox1Q8BJA3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Hmbox1Q8BJA3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Hmbox1Q8BJA3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Hmbox1Q8BJA3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.05■■□□□ 1.12
Hmbox1Q8BJA3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Hmbox1Q8BJA3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Hmbox1Q8BJA3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Hmbox1Q8BJA3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.04■■□□□ 1.12
Hmbox1Q8BJA3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Hmbox1Q8BJA3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Hmbox1Q8BJA3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hmbox1Q8BJA3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms