Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf38Q8BI21 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Rnf38Q8BI21 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rnf38Q8BI21 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.16■■□□□ 1.14
Rnf38Q8BI21 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf38Q8BI21 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf38Q8BI21 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.15■■□□□ 1.14
Rnf38Q8BI21 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf38Q8BI21 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf38Q8BI21 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rnf38Q8BI21 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Rnf38Q8BI21 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rnf38Q8BI21 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.14■■□□□ 1.14
Rnf38Q8BI21 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rnf38Q8BI21 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf38Q8BI21 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf38Q8BI21 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rnf38Q8BI21 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.13■■□□□ 1.13
Rnf38Q8BI21 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf38Q8BI21 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rnf38Q8BI21 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf38Q8BI21 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf38Q8BI21 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf38Q8BI21 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf38Q8BI21 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rnf38Q8BI21 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Rnf38Q8BI21 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf38Q8BI21 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf38Q8BI21 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rnf38Q8BI21 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Rnf38Q8BI21 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf38Q8BI21 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.1■■□□□ 1.13
Rnf38Q8BI21 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rnf38Q8BI21 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf38Q8BI21 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.09■■□□□ 1.13
Rnf38Q8BI21 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Rnf38Q8BI21 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Rnf38Q8BI21 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rnf38Q8BI21 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
Rnf38Q8BI21 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Rnf38Q8BI21 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Rnf38Q8BI21 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rnf38Q8BI21 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Rnf38Q8BI21 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Rnf38Q8BI21 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf38Q8BI21 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf38Q8BI21 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf38Q8BI21 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf38Q8BI21 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf38Q8BI21 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
Rnf38Q8BI21 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Rnf38Q8BI21 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Rnf38Q8BI21 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Rnf38Q8BI21 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Rnf38Q8BI21 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf38Q8BI21 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rnf38Q8BI21 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.05■■□□□ 1.12
Rnf38Q8BI21 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
Rnf38Q8BI21 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.05■■□□□ 1.12
Rnf38Q8BI21 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf38Q8BI21 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Rnf38Q8BI21 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf38Q8BI21 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Rnf38Q8BI21 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf38Q8BI21 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rnf38Q8BI21 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.04■■□□□ 1.12
Rnf38Q8BI21 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf38Q8BI21 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf38Q8BI21 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rnf38Q8BI21 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf38Q8BI21 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf38Q8BI21 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf38Q8BI21 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf38Q8BI21 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf38Q8BI21 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rnf38Q8BI21 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rnf38Q8BI21 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Rnf38Q8BI21 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.01■■□□□ 1.11
Rnf38Q8BI21 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf38Q8BI21 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf38Q8BI21 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.01■■□□□ 1.11
Rnf38Q8BI21 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf38Q8BI21 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rnf38Q8BI21 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Rnf38Q8BI21 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22■■□□□ 1.11
Rnf38Q8BI21 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf38Q8BI21 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Rnf38Q8BI21 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf38Q8BI21 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
Rnf38Q8BI21 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Rnf38Q8BI21 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.98■■□□□ 1.11
Rnf38Q8BI21 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Rnf38Q8BI21 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf38Q8BI21 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf38Q8BI21 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf38Q8BI21 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf38Q8BI21 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rnf38Q8BI21 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Rnf38Q8BI21 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.97■■□□□ 1.11
Rnf38Q8BI21 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms