Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Nucks1Q80XU3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.5■■□□□ 1.51
Nucks1Q80XU3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Nucks1Q80XU3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Nucks1Q80XU3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Nucks1Q80XU3 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.5■■□□□ 1.51
Nucks1Q80XU3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Nucks1Q80XU3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Nucks1Q80XU3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Nucks1Q80XU3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Nucks1Q80XU3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Nucks1Q80XU3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Nucks1Q80XU3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.48■■□□□ 1.51
Nucks1Q80XU3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Nucks1Q80XU3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Nucks1Q80XU3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Nucks1Q80XU3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Nucks1Q80XU3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Nucks1Q80XU3 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Nucks1Q80XU3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Nucks1Q80XU3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Nucks1Q80XU3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Nucks1Q80XU3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.46■■□□□ 1.51
Nucks1Q80XU3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Nucks1Q80XU3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Nucks1Q80XU3 Gm6821-201ENSMUST00000107540 542 ntBASIC24.45■■□□□ 1.5
Nucks1Q80XU3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.45■■□□□ 1.5
Nucks1Q80XU3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.44■■□□□ 1.5
Nucks1Q80XU3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.44■■□□□ 1.5
Nucks1Q80XU3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Nucks1Q80XU3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Nucks1Q80XU3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Nucks1Q80XU3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Nucks1Q80XU3 Gm37136-201ENSMUST00000194368 194 ntBASIC24.42■■□□□ 1.5
Nucks1Q80XU3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Nucks1Q80XU3 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.41■■□□□ 1.5
Nucks1Q80XU3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Nucks1Q80XU3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Nucks1Q80XU3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Nucks1Q80XU3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Nucks1Q80XU3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Nucks1Q80XU3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Nucks1Q80XU3 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.4■■□□□ 1.5
Nucks1Q80XU3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Nucks1Q80XU3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
Nucks1Q80XU3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
Nucks1Q80XU3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Nucks1Q80XU3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Nucks1Q80XU3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Nucks1Q80XU3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Nucks1Q80XU3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Nucks1Q80XU3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Nucks1Q80XU3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Nucks1Q80XU3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.36■■□□□ 1.49
Nucks1Q80XU3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Nucks1Q80XU3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Nucks1Q80XU3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Nucks1Q80XU3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Nucks1Q80XU3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Nucks1Q80XU3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Nucks1Q80XU3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Nucks1Q80XU3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Nucks1Q80XU3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Nucks1Q80XU3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Nucks1Q80XU3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Nucks1Q80XU3 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.33■■□□□ 1.49
Nucks1Q80XU3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.48
Nucks1Q80XU3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Nucks1Q80XU3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Nucks1Q80XU3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Nucks1Q80XU3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Nucks1Q80XU3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24.31■■□□□ 1.48
Nucks1Q80XU3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Nucks1Q80XU3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Nucks1Q80XU3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.3■■□□□ 1.48
Nucks1Q80XU3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Nucks1Q80XU3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Nucks1Q80XU3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Nucks1Q80XU3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Nucks1Q80XU3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Nucks1Q80XU3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.28■■□□□ 1.48
Nucks1Q80XU3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Nucks1Q80XU3 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Nucks1Q80XU3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Nucks1Q80XU3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.27■■□□□ 1.48
Nucks1Q80XU3 Gm8503-201ENSMUST00000118131 455 ntBASIC24.27■■□□□ 1.48
Nucks1Q80XU3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.27■■□□□ 1.48
Nucks1Q80XU3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Nucks1Q80XU3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.27■■□□□ 1.48
Nucks1Q80XU3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Nucks1Q80XU3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Nucks1Q80XU3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Nucks1Q80XU3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Nucks1Q80XU3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Nucks1Q80XU3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Nucks1Q80XU3 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Nucks1Q80XU3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Nucks1Q80XU3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Nucks1Q80XU3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Nucks1Q80XU3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms