Protein–RNA interactions for Protein: Q6AW69

Cgnl1, Cingulin-like protein 1, mousemouse

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgnl1Q6AW69 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Cgnl1Q6AW69 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.31■■■□□ 2.12
Cgnl1Q6AW69 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
Cgnl1Q6AW69 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28.31■■■□□ 2.12
Cgnl1Q6AW69 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
Cgnl1Q6AW69 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cgnl1Q6AW69 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cgnl1Q6AW69 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cgnl1Q6AW69 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cgnl1Q6AW69 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
Cgnl1Q6AW69 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cgnl1Q6AW69 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28.28■■■□□ 2.12
Cgnl1Q6AW69 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cgnl1Q6AW69 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
Cgnl1Q6AW69 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
Cgnl1Q6AW69 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Cgnl1Q6AW69 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Cgnl1Q6AW69 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cgnl1Q6AW69 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Cgnl1Q6AW69 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cgnl1Q6AW69 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cgnl1Q6AW69 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cgnl1Q6AW69 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cgnl1Q6AW69 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Cgnl1Q6AW69 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Cgnl1Q6AW69 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Cgnl1Q6AW69 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Cgnl1Q6AW69 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cgnl1Q6AW69 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cgnl1Q6AW69 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cgnl1Q6AW69 Gm42699-201ENSMUST00000198104 1657 ntBASIC28.22■■■□□ 2.11
Cgnl1Q6AW69 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Cgnl1Q6AW69 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Cgnl1Q6AW69 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
Cgnl1Q6AW69 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
Cgnl1Q6AW69 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Cgnl1Q6AW69 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Cgnl1Q6AW69 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Cgnl1Q6AW69 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Cgnl1Q6AW69 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Cgnl1Q6AW69 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Cgnl1Q6AW69 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.19■■■□□ 2.1
Cgnl1Q6AW69 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Cgnl1Q6AW69 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Cgnl1Q6AW69 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.18■■■□□ 2.1
Cgnl1Q6AW69 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cgnl1Q6AW69 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cgnl1Q6AW69 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC28.17■■■□□ 2.1
Cgnl1Q6AW69 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cgnl1Q6AW69 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.17■■■□□ 2.1
Cgnl1Q6AW69 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.17■■■□□ 2.1
Cgnl1Q6AW69 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cgnl1Q6AW69 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cgnl1Q6AW69 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC28.16■■■□□ 2.1
Cgnl1Q6AW69 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Cgnl1Q6AW69 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Cgnl1Q6AW69 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Cgnl1Q6AW69 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cgnl1Q6AW69 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Cgnl1Q6AW69 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC28.15■■■□□ 2.1
Cgnl1Q6AW69 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Cgnl1Q6AW69 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cgnl1Q6AW69 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cgnl1Q6AW69 Il17rd-202ENSMUST00000223942 2186 ntBASIC28.14■■■□□ 2.1
Cgnl1Q6AW69 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Cgnl1Q6AW69 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28.14■■■□□ 2.1
Cgnl1Q6AW69 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.14■■■□□ 2.1
Cgnl1Q6AW69 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Cgnl1Q6AW69 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Cgnl1Q6AW69 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
Cgnl1Q6AW69 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Cgnl1Q6AW69 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Cgnl1Q6AW69 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Cgnl1Q6AW69 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Cgnl1Q6AW69 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Cgnl1Q6AW69 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Cgnl1Q6AW69 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
Cgnl1Q6AW69 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Cgnl1Q6AW69 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Cgnl1Q6AW69 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Cgnl1Q6AW69 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Cgnl1Q6AW69 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
Cgnl1Q6AW69 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Cgnl1Q6AW69 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Cgnl1Q6AW69 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Cgnl1Q6AW69 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Cgnl1Q6AW69 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Cgnl1Q6AW69 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Cgnl1Q6AW69 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Cgnl1Q6AW69 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Cgnl1Q6AW69 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Cgnl1Q6AW69 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Cgnl1Q6AW69 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC28.03■■■□□ 2.08
Cgnl1Q6AW69 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Cgnl1Q6AW69 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC28.03■■■□□ 2.08
Cgnl1Q6AW69 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
Cgnl1Q6AW69 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Cgnl1Q6AW69 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Cgnl1Q6AW69 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Cgnl1Q6AW69 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms