Protein–RNA interactions for Protein: Q63739

Ptp4a1, Protein tyrosine phosphatase type IVA 1, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptp4a1Q63739 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptp4a1Q63739 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ptp4a1Q63739 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ptp4a1Q63739 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ptp4a1Q63739 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptp4a1Q63739 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.64■□□□□ 0.89
Ptp4a1Q63739 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptp4a1Q63739 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ptp4a1Q63739 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ptp4a1Q63739 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptp4a1Q63739 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptp4a1Q63739 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ptp4a1Q63739 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ptp4a1Q63739 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptp4a1Q63739 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptp4a1Q63739 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ptp4a1Q63739 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ptp4a1Q63739 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptp4a1Q63739 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptp4a1Q63739 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ptp4a1Q63739 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Ptp4a1Q63739 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptp4a1Q63739 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptp4a1Q63739 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ptp4a1Q63739 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ptp4a1Q63739 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.6■□□□□ 0.89
Ptp4a1Q63739 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptp4a1Q63739 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ptp4a1Q63739 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ptp4a1Q63739 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptp4a1Q63739 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ptp4a1Q63739 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptp4a1Q63739 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Ptp4a1Q63739 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ptp4a1Q63739 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ptp4a1Q63739 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.57■□□□□ 0.88
Ptp4a1Q63739 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ptp4a1Q63739 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.57■□□□□ 0.88
Ptp4a1Q63739 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptp4a1Q63739 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ptp4a1Q63739 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptp4a1Q63739 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.56■□□□□ 0.88
Ptp4a1Q63739 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptp4a1Q63739 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptp4a1Q63739 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.55■□□□□ 0.88
Ptp4a1Q63739 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ptp4a1Q63739 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptp4a1Q63739 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ptp4a1Q63739 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptp4a1Q63739 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ptp4a1Q63739 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Ptp4a1Q63739 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Ptp4a1Q63739 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptp4a1Q63739 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ptp4a1Q63739 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptp4a1Q63739 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Ptp4a1Q63739 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptp4a1Q63739 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.52■□□□□ 0.87
Ptp4a1Q63739 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.51■□□□□ 0.87
Ptp4a1Q63739 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptp4a1Q63739 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptp4a1Q63739 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptp4a1Q63739 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptp4a1Q63739 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptp4a1Q63739 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptp4a1Q63739 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptp4a1Q63739 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptp4a1Q63739 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptp4a1Q63739 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptp4a1Q63739 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptp4a1Q63739 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.49■□□□□ 0.87
Ptp4a1Q63739 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ptp4a1Q63739 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptp4a1Q63739 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ptp4a1Q63739 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ptp4a1Q63739 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ptp4a1Q63739 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ptp4a1Q63739 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptp4a1Q63739 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.48■□□□□ 0.87
Ptp4a1Q63739 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptp4a1Q63739 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptp4a1Q63739 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.48■□□□□ 0.87
Ptp4a1Q63739 Nkain2-201ENSMUST00000092602 558 ntBASIC20.48■□□□□ 0.87
Ptp4a1Q63739 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ptp4a1Q63739 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ptp4a1Q63739 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ptp4a1Q63739 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ptp4a1Q63739 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Ptp4a1Q63739 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.46■□□□□ 0.87
Ptp4a1Q63739 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ptp4a1Q63739 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.45■□□□□ 0.86
Ptp4a1Q63739 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.45■□□□□ 0.86
Ptp4a1Q63739 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ptp4a1Q63739 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ptp4a1Q63739 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptp4a1Q63739 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ptp4a1Q63739 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptp4a1Q63739 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ptp4a1Q63739 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ptp4a1Q63739 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 125 ms