Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cdkl5Q3UTQ8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Cdkl5Q3UTQ8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cdkl5Q3UTQ8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
Cdkl5Q3UTQ8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC26.64■■□□□ 1.85
Cdkl5Q3UTQ8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Cdkl5Q3UTQ8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cdkl5Q3UTQ8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.63■■□□□ 1.85
Cdkl5Q3UTQ8 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cdkl5Q3UTQ8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Cdkl5Q3UTQ8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Cdkl5Q3UTQ8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Cdkl5Q3UTQ8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Cdkl5Q3UTQ8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Cdkl5Q3UTQ8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cdkl5Q3UTQ8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cdkl5Q3UTQ8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cdkl5Q3UTQ8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cdkl5Q3UTQ8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cdkl5Q3UTQ8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Cdkl5Q3UTQ8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Cdkl5Q3UTQ8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.6■■□□□ 1.85
Cdkl5Q3UTQ8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cdkl5Q3UTQ8 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cdkl5Q3UTQ8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cdkl5Q3UTQ8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.57■■□□□ 1.84
Cdkl5Q3UTQ8 Gm11599-201ENSMUST00000118720 878 ntBASIC26.57■■□□□ 1.84
Cdkl5Q3UTQ8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Cdkl5Q3UTQ8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Cdkl5Q3UTQ8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Cdkl5Q3UTQ8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Cdkl5Q3UTQ8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cdkl5Q3UTQ8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC26.54■■□□□ 1.84
Cdkl5Q3UTQ8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Cdkl5Q3UTQ8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Cdkl5Q3UTQ8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cdkl5Q3UTQ8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cdkl5Q3UTQ8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cdkl5Q3UTQ8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Cdkl5Q3UTQ8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Cdkl5Q3UTQ8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Cdkl5Q3UTQ8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Cdkl5Q3UTQ8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cdkl5Q3UTQ8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
Cdkl5Q3UTQ8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cdkl5Q3UTQ8 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Cdkl5Q3UTQ8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Cdkl5Q3UTQ8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.5■■□□□ 1.83
Cdkl5Q3UTQ8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cdkl5Q3UTQ8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.5■■□□□ 1.83
Cdkl5Q3UTQ8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Cdkl5Q3UTQ8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Cdkl5Q3UTQ8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cdkl5Q3UTQ8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cdkl5Q3UTQ8 Gm4799-201ENSMUST00000095396 657 ntBASIC26.49■■□□□ 1.83
Cdkl5Q3UTQ8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Cdkl5Q3UTQ8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Cdkl5Q3UTQ8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cdkl5Q3UTQ8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Cdkl5Q3UTQ8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.48■■□□□ 1.83
Cdkl5Q3UTQ8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Cdkl5Q3UTQ8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Cdkl5Q3UTQ8 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.46■■□□□ 1.83
Cdkl5Q3UTQ8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.46■■□□□ 1.83
Cdkl5Q3UTQ8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Cdkl5Q3UTQ8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Cdkl5Q3UTQ8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC26.45■■□□□ 1.82
Cdkl5Q3UTQ8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.45■■□□□ 1.82
Cdkl5Q3UTQ8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Cdkl5Q3UTQ8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Cdkl5Q3UTQ8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.44■■□□□ 1.82
Cdkl5Q3UTQ8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Cdkl5Q3UTQ8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Cdkl5Q3UTQ8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cdkl5Q3UTQ8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cdkl5Q3UTQ8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cdkl5Q3UTQ8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cdkl5Q3UTQ8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Cdkl5Q3UTQ8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Cdkl5Q3UTQ8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Cdkl5Q3UTQ8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Cdkl5Q3UTQ8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
Cdkl5Q3UTQ8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Cdkl5Q3UTQ8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Cdkl5Q3UTQ8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Cdkl5Q3UTQ8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
Cdkl5Q3UTQ8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cdkl5Q3UTQ8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Cdkl5Q3UTQ8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cdkl5Q3UTQ8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cdkl5Q3UTQ8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Cdkl5Q3UTQ8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cdkl5Q3UTQ8 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.36■■□□□ 1.81
Cdkl5Q3UTQ8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
Cdkl5Q3UTQ8 Mir3960-201ENSMUST00000198213 73 ntBASIC26.35■■□□□ 1.81
Cdkl5Q3UTQ8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cdkl5Q3UTQ8 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.34■■□□□ 1.81
Cdkl5Q3UTQ8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Cdkl5Q3UTQ8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Cdkl5Q3UTQ8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms