Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fndc4Q3TR08 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Fndc4Q3TR08 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fndc4Q3TR08 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fndc4Q3TR08 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Fndc4Q3TR08 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Fndc4Q3TR08 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Fndc4Q3TR08 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fndc4Q3TR08 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fndc4Q3TR08 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Fndc4Q3TR08 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Fndc4Q3TR08 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Fndc4Q3TR08 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.38■□□□□ 0.69
Fndc4Q3TR08 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Fndc4Q3TR08 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Fndc4Q3TR08 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fndc4Q3TR08 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fndc4Q3TR08 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fndc4Q3TR08 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Fndc4Q3TR08 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Fndc4Q3TR08 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fndc4Q3TR08 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Fndc4Q3TR08 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Fndc4Q3TR08 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Fndc4Q3TR08 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fndc4Q3TR08 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Fndc4Q3TR08 Gm30023-201ENSMUST00000197970 889 ntBASIC19.36■□□□□ 0.69
Fndc4Q3TR08 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Fndc4Q3TR08 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.35■□□□□ 0.69
Fndc4Q3TR08 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fndc4Q3TR08 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Fndc4Q3TR08 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Fndc4Q3TR08 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.34■□□□□ 0.69
Fndc4Q3TR08 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fndc4Q3TR08 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.34■□□□□ 0.69
Fndc4Q3TR08 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Fndc4Q3TR08 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Fndc4Q3TR08 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Fndc4Q3TR08 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fndc4Q3TR08 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Fndc4Q3TR08 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Fndc4Q3TR08 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fndc4Q3TR08 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Fndc4Q3TR08 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fndc4Q3TR08 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fndc4Q3TR08 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.32■□□□□ 0.68
Fndc4Q3TR08 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fndc4Q3TR08 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Fndc4Q3TR08 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fndc4Q3TR08 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Fndc4Q3TR08 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Fndc4Q3TR08 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fndc4Q3TR08 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fndc4Q3TR08 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Fndc4Q3TR08 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fndc4Q3TR08 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Fndc4Q3TR08 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fndc4Q3TR08 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fndc4Q3TR08 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Fndc4Q3TR08 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Fndc4Q3TR08 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Fndc4Q3TR08 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Fndc4Q3TR08 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Fndc4Q3TR08 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Fndc4Q3TR08 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Fndc4Q3TR08 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fndc4Q3TR08 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Fndc4Q3TR08 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
Fndc4Q3TR08 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Fndc4Q3TR08 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.28■□□□□ 0.68
Fndc4Q3TR08 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.28■□□□□ 0.68
Fndc4Q3TR08 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Fndc4Q3TR08 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Fndc4Q3TR08 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Fndc4Q3TR08 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.27■□□□□ 0.68
Fndc4Q3TR08 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fndc4Q3TR08 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Fndc4Q3TR08 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Fndc4Q3TR08 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.27■□□□□ 0.68
Fndc4Q3TR08 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fndc4Q3TR08 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Fndc4Q3TR08 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Fndc4Q3TR08 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.26■□□□□ 0.67
Fndc4Q3TR08 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fndc4Q3TR08 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Fndc4Q3TR08 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Fndc4Q3TR08 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Fndc4Q3TR08 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fndc4Q3TR08 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fndc4Q3TR08 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Fndc4Q3TR08 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.25■□□□□ 0.67
Fndc4Q3TR08 Nkain2-201ENSMUST00000092602 558 ntBASIC19.25■□□□□ 0.67
Fndc4Q3TR08 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Fndc4Q3TR08 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fndc4Q3TR08 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.24■□□□□ 0.67
Fndc4Q3TR08 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fndc4Q3TR08 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.24■□□□□ 0.67
Fndc4Q3TR08 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Fndc4Q3TR08 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fndc4Q3TR08 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms