Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim72Q1XH17 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Trim72Q1XH17 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Trim72Q1XH17 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Trim72Q1XH17 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Trim72Q1XH17 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim72Q1XH17 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
Trim72Q1XH17 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trim72Q1XH17 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trim72Q1XH17 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Trim72Q1XH17 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.54■■□□□ 1.52
Trim72Q1XH17 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trim72Q1XH17 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.53■■□□□ 1.52
Trim72Q1XH17 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Trim72Q1XH17 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Trim72Q1XH17 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Trim72Q1XH17 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim72Q1XH17 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim72Q1XH17 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim72Q1XH17 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.52■■□□□ 1.52
Trim72Q1XH17 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim72Q1XH17 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Trim72Q1XH17 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trim72Q1XH17 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trim72Q1XH17 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim72Q1XH17 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim72Q1XH17 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.5■■□□□ 1.51
Trim72Q1XH17 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim72Q1XH17 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim72Q1XH17 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Trim72Q1XH17 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trim72Q1XH17 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trim72Q1XH17 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Trim72Q1XH17 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trim72Q1XH17 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.48■■□□□ 1.51
Trim72Q1XH17 Gm4799-201ENSMUST00000095396 657 ntBASIC24.48■■□□□ 1.51
Trim72Q1XH17 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Trim72Q1XH17 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim72Q1XH17 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.47■■□□□ 1.51
Trim72Q1XH17 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Trim72Q1XH17 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
Trim72Q1XH17 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Trim72Q1XH17 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Trim72Q1XH17 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.46■■□□□ 1.51
Trim72Q1XH17 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.46■■□□□ 1.51
Trim72Q1XH17 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim72Q1XH17 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.46■■□□□ 1.51
Trim72Q1XH17 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim72Q1XH17 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trim72Q1XH17 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Trim72Q1XH17 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.44■■□□□ 1.5
Trim72Q1XH17 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Trim72Q1XH17 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Trim72Q1XH17 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim72Q1XH17 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Trim72Q1XH17 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trim72Q1XH17 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trim72Q1XH17 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trim72Q1XH17 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Trim72Q1XH17 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trim72Q1XH17 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Trim72Q1XH17 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Trim72Q1XH17 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Trim72Q1XH17 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim72Q1XH17 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Trim72Q1XH17 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Trim72Q1XH17 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Trim72Q1XH17 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
Trim72Q1XH17 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Trim72Q1XH17 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.39■■□□□ 1.49
Trim72Q1XH17 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Trim72Q1XH17 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
Trim72Q1XH17 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Trim72Q1XH17 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim72Q1XH17 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim72Q1XH17 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.38■■□□□ 1.49
Trim72Q1XH17 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC24.37■■□□□ 1.49
Trim72Q1XH17 Mir3960-201ENSMUST00000198213 73 ntBASIC24.37■■□□□ 1.49
Trim72Q1XH17 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Trim72Q1XH17 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Trim72Q1XH17 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.36■■□□□ 1.49
Trim72Q1XH17 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim72Q1XH17 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim72Q1XH17 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Trim72Q1XH17 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Trim72Q1XH17 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Trim72Q1XH17 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Trim72Q1XH17 Gm9812-201ENSMUST00000061934 968 ntBASIC24.33■■□□□ 1.49
Trim72Q1XH17 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim72Q1XH17 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.32■■□□□ 1.48
Trim72Q1XH17 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Trim72Q1XH17 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Trim72Q1XH17 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Trim72Q1XH17 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trim72Q1XH17 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Trim72Q1XH17 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Trim72Q1XH17 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.3■■□□□ 1.48
Trim72Q1XH17 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Trim72Q1XH17 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.3■■□□□ 1.48
Trim72Q1XH17 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms