Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptchd3Q0EEE2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ptchd3Q0EEE2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ptchd3Q0EEE2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ptchd3Q0EEE2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Ptchd3Q0EEE2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ptchd3Q0EEE2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ptchd3Q0EEE2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ptchd3Q0EEE2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ptchd3Q0EEE2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ptchd3Q0EEE2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ptchd3Q0EEE2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ptchd3Q0EEE2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.04■■□□□ 1.12
Ptchd3Q0EEE2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ptchd3Q0EEE2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Ptchd3Q0EEE2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.04■■□□□ 1.12
Ptchd3Q0EEE2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ptchd3Q0EEE2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ptchd3Q0EEE2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ptchd3Q0EEE2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ptchd3Q0EEE2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ptchd3Q0EEE2 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ptchd3Q0EEE2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
Ptchd3Q0EEE2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.01■■□□□ 1.11
Ptchd3Q0EEE2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ptchd3Q0EEE2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ptchd3Q0EEE2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ptchd3Q0EEE2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ptchd3Q0EEE2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Ptchd3Q0EEE2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ptchd3Q0EEE2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Ptchd3Q0EEE2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Ptchd3Q0EEE2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Ptchd3Q0EEE2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ptchd3Q0EEE2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ptchd3Q0EEE2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Ptchd3Q0EEE2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ptchd3Q0EEE2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.97■■□□□ 1.11
Ptchd3Q0EEE2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptchd3Q0EEE2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ptchd3Q0EEE2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.97■■□□□ 1.11
Ptchd3Q0EEE2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.97■■□□□ 1.11
Ptchd3Q0EEE2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Ptchd3Q0EEE2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
Ptchd3Q0EEE2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptchd3Q0EEE2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Ptchd3Q0EEE2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptchd3Q0EEE2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ptchd3Q0EEE2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptchd3Q0EEE2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptchd3Q0EEE2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ptchd3Q0EEE2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ptchd3Q0EEE2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.94■■□□□ 1.1
Ptchd3Q0EEE2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ptchd3Q0EEE2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Ptchd3Q0EEE2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ptchd3Q0EEE2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ptchd3Q0EEE2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ptchd3Q0EEE2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Ptchd3Q0EEE2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
Ptchd3Q0EEE2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ptchd3Q0EEE2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ptchd3Q0EEE2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ptchd3Q0EEE2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ptchd3Q0EEE2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ptchd3Q0EEE2 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.9■■□□□ 1.1
Ptchd3Q0EEE2 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.9■■□□□ 1.1
Ptchd3Q0EEE2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptchd3Q0EEE2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptchd3Q0EEE2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptchd3Q0EEE2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Ptchd3Q0EEE2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.9■■□□□ 1.1
Ptchd3Q0EEE2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ptchd3Q0EEE2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ptchd3Q0EEE2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Ptchd3Q0EEE2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ptchd3Q0EEE2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ptchd3Q0EEE2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ptchd3Q0EEE2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.89■■□□□ 1.09
Ptchd3Q0EEE2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Ptchd3Q0EEE2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ptchd3Q0EEE2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ptchd3Q0EEE2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ptchd3Q0EEE2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ptchd3Q0EEE2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ptchd3Q0EEE2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ptchd3Q0EEE2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ptchd3Q0EEE2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.87■■□□□ 1.09
Ptchd3Q0EEE2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ptchd3Q0EEE2 Gm30023-201ENSMUST00000197970 889 ntBASIC21.87■■□□□ 1.09
Ptchd3Q0EEE2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ptchd3Q0EEE2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.87■■□□□ 1.09
Ptchd3Q0EEE2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ptchd3Q0EEE2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ptchd3Q0EEE2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ptchd3Q0EEE2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Ptchd3Q0EEE2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.86■■□□□ 1.09
Ptchd3Q0EEE2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ptchd3Q0EEE2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.86■■□□□ 1.09
Ptchd3Q0EEE2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms