Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Six5P70178 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Six5P70178 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.44■■□□□ 1.02
Six5P70178 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Six5P70178 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Six5P70178 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Six5P70178 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Six5P70178 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.43■■□□□ 1.02
Six5P70178 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Six5P70178 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.43■■□□□ 1.02
Six5P70178 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Six5P70178 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Six5P70178 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.42■■□□□ 1.02
Six5P70178 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Six5P70178 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Six5P70178 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Six5P70178 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Six5P70178 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Six5P70178 Gm4799-201ENSMUST00000095396 657 ntBASIC21.41■■□□□ 1.02
Six5P70178 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Six5P70178 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Six5P70178 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.4■■□□□ 1.02
Six5P70178 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Six5P70178 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Six5P70178 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Six5P70178 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.4■■□□□ 1.02
Six5P70178 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Six5P70178 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Six5P70178 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Six5P70178 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Six5P70178 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Six5P70178 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Six5P70178 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.38■■□□□ 1.01
Six5P70178 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Six5P70178 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.37■■□□□ 1.01
Six5P70178 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Six5P70178 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Six5P70178 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Six5P70178 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.36■■□□□ 1.01
Six5P70178 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Six5P70178 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Six5P70178 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Six5P70178 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Six5P70178 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Six5P70178 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.35■■□□□ 1.01
Six5P70178 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Six5P70178 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Six5P70178 Mir3960-201ENSMUST00000198213 73 ntBASIC21.34■■□□□ 1.01
Six5P70178 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.34■■□□□ 1.01
Six5P70178 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Six5P70178 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Six5P70178 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Six5P70178 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Six5P70178 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Six5P70178 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.33■■□□□ 1.01
Six5P70178 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Six5P70178 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Six5P70178 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Six5P70178 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.32■■□□□ 1
Six5P70178 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Six5P70178 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.31■■□□□ 1
Six5P70178 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Six5P70178 Gm9812-201ENSMUST00000061934 968 ntBASIC21.31■■□□□ 1
Six5P70178 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Six5P70178 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Six5P70178 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Six5P70178 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.29■■□□□ 1
Six5P70178 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.29■■□□□ 1
Six5P70178 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Six5P70178 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Six5P70178 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.28■■□□□ 1
Six5P70178 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.28■■□□□ 1
Six5P70178 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Six5P70178 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Six5P70178 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.26■□□□□ 0.99
Six5P70178 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.26■□□□□ 0.99
Six5P70178 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Six5P70178 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Six5P70178 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Six5P70178 Gm45364-201ENSMUST00000210883 159 ntBASIC21.25■□□□□ 0.99
Six5P70178 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.25■□□□□ 0.99
Six5P70178 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Six5P70178 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Six5P70178 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Six5P70178 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Six5P70178 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Six5P70178 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Six5P70178 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Six5P70178 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six5P70178 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six5P70178 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six5P70178 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Six5P70178 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Six5P70178 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Six5P70178 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Six5P70178 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Six5P70178 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Six5P70178 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.21■□□□□ 0.99
Six5P70178 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Six5P70178 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms