Protein–RNA interactions for Protein: P56475

Gabrr1, Gamma-aminobutyric acid receptor subunit rho-1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabrr1P56475 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gabrr1P56475 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Gabrr1P56475 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gabrr1P56475 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Gabrr1P56475 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gabrr1P56475 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gabrr1P56475 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Gabrr1P56475 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gabrr1P56475 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gabrr1P56475 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gabrr1P56475 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.42■□□□□ 0.7
Gabrr1P56475 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gabrr1P56475 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gabrr1P56475 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gabrr1P56475 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gabrr1P56475 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Gabrr1P56475 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gabrr1P56475 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gabrr1P56475 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Gabrr1P56475 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.39■□□□□ 0.69
Gabrr1P56475 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.39■□□□□ 0.69
Gabrr1P56475 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Gabrr1P56475 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gabrr1P56475 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Gabrr1P56475 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Gabrr1P56475 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Gabrr1P56475 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gabrr1P56475 Gm30023-201ENSMUST00000197970 889 ntBASIC19.38■□□□□ 0.69
Gabrr1P56475 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Gabrr1P56475 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.38■□□□□ 0.69
Gabrr1P56475 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gabrr1P56475 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Gabrr1P56475 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gabrr1P56475 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gabrr1P56475 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Gabrr1P56475 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gabrr1P56475 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gabrr1P56475 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.36■□□□□ 0.69
Gabrr1P56475 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Gabrr1P56475 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gabrr1P56475 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Gabrr1P56475 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Gabrr1P56475 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gabrr1P56475 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Gabrr1P56475 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.36■□□□□ 0.69
Gabrr1P56475 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Gabrr1P56475 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gabrr1P56475 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gabrr1P56475 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gabrr1P56475 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Gabrr1P56475 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gabrr1P56475 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gabrr1P56475 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Gabrr1P56475 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.35■□□□□ 0.69
Gabrr1P56475 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gabrr1P56475 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gabrr1P56475 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gabrr1P56475 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gabrr1P56475 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gabrr1P56475 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gabrr1P56475 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gabrr1P56475 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gabrr1P56475 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gabrr1P56475 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gabrr1P56475 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Gabrr1P56475 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Gabrr1P56475 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gabrr1P56475 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gabrr1P56475 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gabrr1P56475 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gabrr1P56475 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gabrr1P56475 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gabrr1P56475 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gabrr1P56475 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Gabrr1P56475 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.31■□□□□ 0.68
Gabrr1P56475 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gabrr1P56475 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gabrr1P56475 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Gabrr1P56475 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gabrr1P56475 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gabrr1P56475 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Gabrr1P56475 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.31■□□□□ 0.68
Gabrr1P56475 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gabrr1P56475 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Gabrr1P56475 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gabrr1P56475 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gabrr1P56475 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.3■□□□□ 0.68
Gabrr1P56475 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gabrr1P56475 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gabrr1P56475 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gabrr1P56475 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gabrr1P56475 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gabrr1P56475 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gabrr1P56475 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gabrr1P56475 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gabrr1P56475 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Gabrr1P56475 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Gabrr1P56475 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.28■□□□□ 0.68
Gabrr1P56475 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gabrr1P56475 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms