Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.95■□□□□ 0.78
GdnfP48540 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GdnfP48540 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
GdnfP48540 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GdnfP48540 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GdnfP48540 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
GdnfP48540 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GdnfP48540 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
GdnfP48540 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GdnfP48540 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GdnfP48540 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GdnfP48540 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GdnfP48540 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.93■□□□□ 0.78
GdnfP48540 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GdnfP48540 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
GdnfP48540 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
GdnfP48540 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GdnfP48540 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GdnfP48540 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GdnfP48540 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GdnfP48540 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
GdnfP48540 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GdnfP48540 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
GdnfP48540 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
GdnfP48540 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GdnfP48540 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GdnfP48540 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GdnfP48540 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.91■□□□□ 0.78
GdnfP48540 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GdnfP48540 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GdnfP48540 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
GdnfP48540 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GdnfP48540 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GdnfP48540 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GdnfP48540 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
GdnfP48540 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.9■□□□□ 0.78
GdnfP48540 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
GdnfP48540 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GdnfP48540 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GdnfP48540 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
GdnfP48540 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GdnfP48540 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GdnfP48540 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GdnfP48540 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
GdnfP48540 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GdnfP48540 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
GdnfP48540 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GdnfP48540 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GdnfP48540 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
GdnfP48540 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
GdnfP48540 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.87■□□□□ 0.77
GdnfP48540 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
GdnfP48540 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
GdnfP48540 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
GdnfP48540 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
GdnfP48540 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GdnfP48540 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
GdnfP48540 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
GdnfP48540 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
GdnfP48540 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
GdnfP48540 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
GdnfP48540 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.86■□□□□ 0.77
GdnfP48540 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.85■□□□□ 0.77
GdnfP48540 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GdnfP48540 Gm30023-201ENSMUST00000197970 889 ntBASIC19.84■□□□□ 0.77
GdnfP48540 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
GdnfP48540 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GdnfP48540 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
GdnfP48540 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GdnfP48540 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GdnfP48540 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GdnfP48540 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.83■□□□□ 0.77
GdnfP48540 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
GdnfP48540 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
GdnfP48540 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
GdnfP48540 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.82■□□□□ 0.76
GdnfP48540 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.82■□□□□ 0.76
GdnfP48540 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GdnfP48540 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GdnfP48540 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GdnfP48540 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
GdnfP48540 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.81■□□□□ 0.76
GdnfP48540 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
GdnfP48540 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GdnfP48540 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.8■□□□□ 0.76
GdnfP48540 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
GdnfP48540 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.8■□□□□ 0.76
GdnfP48540 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
GdnfP48540 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GdnfP48540 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GdnfP48540 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
GdnfP48540 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GdnfP48540 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
GdnfP48540 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
GdnfP48540 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.79■□□□□ 0.76
GdnfP48540 Nkain2-201ENSMUST00000092602 558 ntBASIC19.79■□□□□ 0.76
GdnfP48540 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GdnfP48540 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GdnfP48540 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
GdnfP48540 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms