Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Thbs1P35441 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Thbs1P35441 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Thbs1P35441 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Thbs1P35441 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Thbs1P35441 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Thbs1P35441 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Thbs1P35441 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Thbs1P35441 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Thbs1P35441 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Thbs1P35441 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Thbs1P35441 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Thbs1P35441 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Thbs1P35441 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Thbs1P35441 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Thbs1P35441 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Thbs1P35441 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.2■□□□□ 0.98
Thbs1P35441 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Thbs1P35441 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Thbs1P35441 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Thbs1P35441 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.19■□□□□ 0.98
Thbs1P35441 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.19■□□□□ 0.98
Thbs1P35441 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Thbs1P35441 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Thbs1P35441 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Thbs1P35441 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Thbs1P35441 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Thbs1P35441 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thbs1P35441 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Thbs1P35441 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thbs1P35441 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thbs1P35441 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Thbs1P35441 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Thbs1P35441 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Thbs1P35441 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Thbs1P35441 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Thbs1P35441 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Thbs1P35441 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Thbs1P35441 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Thbs1P35441 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Thbs1P35441 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Thbs1P35441 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.14■□□□□ 0.97
Thbs1P35441 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Thbs1P35441 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Thbs1P35441 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Thbs1P35441 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Thbs1P35441 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Thbs1P35441 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Thbs1P35441 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Thbs1P35441 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Thbs1P35441 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Thbs1P35441 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Thbs1P35441 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Thbs1P35441 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.12■□□□□ 0.97
Thbs1P35441 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Thbs1P35441 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Thbs1P35441 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Thbs1P35441 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Thbs1P35441 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Thbs1P35441 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.11■□□□□ 0.97
Thbs1P35441 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.11■□□□□ 0.97
Thbs1P35441 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Thbs1P35441 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Thbs1P35441 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.11■□□□□ 0.97
Thbs1P35441 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.1■□□□□ 0.97
Thbs1P35441 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Thbs1P35441 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Thbs1P35441 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Thbs1P35441 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Thbs1P35441 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.1■□□□□ 0.97
Thbs1P35441 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.09■□□□□ 0.97
Thbs1P35441 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Thbs1P35441 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Thbs1P35441 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
Thbs1P35441 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Thbs1P35441 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Thbs1P35441 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Thbs1P35441 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.08■□□□□ 0.97
Thbs1P35441 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Thbs1P35441 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Thbs1P35441 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Thbs1P35441 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Thbs1P35441 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Thbs1P35441 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Thbs1P35441 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Thbs1P35441 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Thbs1P35441 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Thbs1P35441 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Thbs1P35441 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Thbs1P35441 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Thbs1P35441 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Thbs1P35441 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Thbs1P35441 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Thbs1P35441 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Thbs1P35441 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Thbs1P35441 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Thbs1P35441 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Thbs1P35441 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Thbs1P35441 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21■□□□□ 0.95
Thbs1P35441 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms