Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
P04224 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P04224 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
P04224 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
P04224 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
P04224 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
P04224 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
P04224 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P04224 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
P04224 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P04224 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P04224 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P04224 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
P04224 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
P04224 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P04224 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
P04224 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
P04224 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
P04224 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
P04224 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
P04224 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
P04224 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
P04224 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
P04224 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
P04224 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
P04224 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
P04224 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
P04224 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
P04224 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
P04224 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
P04224 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
P04224 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
P04224 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
P04224 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.91■□□□□ 0.78
P04224 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
P04224 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.91■□□□□ 0.78
P04224 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
P04224 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P04224 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
P04224 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P04224 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
P04224 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
P04224 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P04224 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P04224 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P04224 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P04224 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
P04224 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P04224 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
P04224 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
P04224 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
P04224 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
P04224 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04224 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04224 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
P04224 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04224 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04224 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04224 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
P04224 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P04224 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
P04224 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
P04224 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P04224 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P04224 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P04224 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P04224 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
P04224 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
P04224 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
P04224 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
P04224 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
P04224 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
P04224 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
P04224 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
P04224 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
P04224 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
P04224 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P04224 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
P04224 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
P04224 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
P04224 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
P04224 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
P04224 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
P04224 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04224 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04224 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
P04224 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
P04224 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.8■□□□□ 0.76
P04224 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
P04224 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
P04224 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
P04224 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
P04224 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
P04224 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
P04224 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
P04224 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
P04224 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
P04224 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.78■□□□□ 0.76
P04224 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
P04224 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms