Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Zfp131-205ENSMUST00000223812 663 ntBASIC19.31■□□□□ 0.68
Ifna1P01572 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ifna1P01572 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ifna1P01572 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Ifna1P01572 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.29■□□□□ 0.68
Ifna1P01572 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ifna1P01572 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ifna1P01572 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.27■□□□□ 0.68
Ifna1P01572 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ifna1P01572 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ifna1P01572 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ifna1P01572 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ifna1P01572 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ifna1P01572 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ifna1P01572 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ifna1P01572 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Ifna1P01572 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ifna1P01572 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ifna1P01572 Gm24970-201ENSMUST00000175582 82 ntBASIC19.25■□□□□ 0.67
Ifna1P01572 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.25■□□□□ 0.67
Ifna1P01572 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Ifna1P01572 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ifna1P01572 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ifna1P01572 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ifna1P01572 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ifna1P01572 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ifna1P01572 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ifna1P01572 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ifna1P01572 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ifna1P01572 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ifna1P01572 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.22■□□□□ 0.67
Ifna1P01572 Gm9397-201ENSMUST00000200125 605 ntBASIC19.22■□□□□ 0.67
Ifna1P01572 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ifna1P01572 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ifna1P01572 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.21■□□□□ 0.67
Ifna1P01572 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ifna1P01572 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ifna1P01572 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ifna1P01572 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ifna1P01572 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ifna1P01572 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ifna1P01572 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ifna1P01572 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ifna1P01572 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ifna1P01572 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ifna1P01572 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ifna1P01572 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ifna1P01572 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Ifna1P01572 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ifna1P01572 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ifna1P01572 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.19■□□□□ 0.66
Ifna1P01572 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ifna1P01572 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ifna1P01572 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Ifna1P01572 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Ifna1P01572 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ifna1P01572 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ifna1P01572 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ifna1P01572 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ifna1P01572 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ifna1P01572 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ifna1P01572 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ifna1P01572 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ifna1P01572 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.17■□□□□ 0.66
Ifna1P01572 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ifna1P01572 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ifna1P01572 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ifna1P01572 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ifna1P01572 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.16■□□□□ 0.66
Ifna1P01572 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ifna1P01572 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ifna1P01572 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ifna1P01572 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ifna1P01572 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ifna1P01572 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ifna1P01572 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ifna1P01572 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ifna1P01572 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ifna1P01572 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ifna1P01572 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ifna1P01572 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ifna1P01572 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.13■□□□□ 0.65
Ifna1P01572 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ifna1P01572 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ifna1P01572 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ifna1P01572 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.12■□□□□ 0.65
Ifna1P01572 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ifna1P01572 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ifna1P01572 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ifna1P01572 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.1■□□□□ 0.65
Ifna1P01572 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ifna1P01572 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ifna1P01572 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ifna1P01572 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ifna1P01572 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ifna1P01572 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ifna1P01572 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.09■□□□□ 0.65
Ifna1P01572 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.09■□□□□ 0.65
Ifna1P01572 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ifna1P01572 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 116.6 ms