Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CcnkO88874 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CcnkO88874 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CcnkO88874 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CcnkO88874 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.17■□□□□ 0.82
CcnkO88874 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CcnkO88874 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CcnkO88874 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.16■□□□□ 0.82
CcnkO88874 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CcnkO88874 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CcnkO88874 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CcnkO88874 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CcnkO88874 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CcnkO88874 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CcnkO88874 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CcnkO88874 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CcnkO88874 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CcnkO88874 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CcnkO88874 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CcnkO88874 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CcnkO88874 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CcnkO88874 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CcnkO88874 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CcnkO88874 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
CcnkO88874 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CcnkO88874 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CcnkO88874 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.12■□□□□ 0.81
CcnkO88874 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CcnkO88874 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CcnkO88874 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.11■□□□□ 0.81
CcnkO88874 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.11■□□□□ 0.81
CcnkO88874 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CcnkO88874 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CcnkO88874 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CcnkO88874 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CcnkO88874 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CcnkO88874 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CcnkO88874 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.1■□□□□ 0.81
CcnkO88874 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CcnkO88874 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CcnkO88874 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CcnkO88874 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CcnkO88874 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CcnkO88874 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CcnkO88874 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
CcnkO88874 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CcnkO88874 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CcnkO88874 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CcnkO88874 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CcnkO88874 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CcnkO88874 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CcnkO88874 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.07■□□□□ 0.8
CcnkO88874 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CcnkO88874 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.07■□□□□ 0.8
CcnkO88874 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CcnkO88874 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CcnkO88874 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CcnkO88874 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CcnkO88874 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CcnkO88874 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CcnkO88874 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CcnkO88874 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CcnkO88874 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CcnkO88874 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CcnkO88874 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.05■□□□□ 0.8
CcnkO88874 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CcnkO88874 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CcnkO88874 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
CcnkO88874 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CcnkO88874 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CcnkO88874 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.04■□□□□ 0.8
CcnkO88874 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CcnkO88874 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CcnkO88874 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CcnkO88874 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.03■□□□□ 0.8
CcnkO88874 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CcnkO88874 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CcnkO88874 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CcnkO88874 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CcnkO88874 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CcnkO88874 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CcnkO88874 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CcnkO88874 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CcnkO88874 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.02■□□□□ 0.8
CcnkO88874 Gm30023-201ENSMUST00000197970 889 ntBASIC20.02■□□□□ 0.8
CcnkO88874 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CcnkO88874 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.02■□□□□ 0.8
CcnkO88874 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
CcnkO88874 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CcnkO88874 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CcnkO88874 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CcnkO88874 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CcnkO88874 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CcnkO88874 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CcnkO88874 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CcnkO88874 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CcnkO88874 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CcnkO88874 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CcnkO88874 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CcnkO88874 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms