Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BckdkO55028 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
BckdkO55028 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BckdkO55028 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
BckdkO55028 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
BckdkO55028 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
BckdkO55028 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
BckdkO55028 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
BckdkO55028 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
BckdkO55028 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
BckdkO55028 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
BckdkO55028 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BckdkO55028 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BckdkO55028 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BckdkO55028 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
BckdkO55028 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
BckdkO55028 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BckdkO55028 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
BckdkO55028 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
BckdkO55028 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
BckdkO55028 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.06■□□□□ 0.96
BckdkO55028 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BckdkO55028 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BckdkO55028 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.06■□□□□ 0.96
BckdkO55028 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
BckdkO55028 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
BckdkO55028 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
BckdkO55028 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
BckdkO55028 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
BckdkO55028 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
BckdkO55028 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
BckdkO55028 Gm11175-201ENSMUST00000116172 543 ntBASIC21.04■□□□□ 0.96
BckdkO55028 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BckdkO55028 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
BckdkO55028 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.04■□□□□ 0.96
BckdkO55028 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
BckdkO55028 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
BckdkO55028 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
BckdkO55028 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BckdkO55028 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BckdkO55028 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BckdkO55028 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.03■□□□□ 0.96
BckdkO55028 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
BckdkO55028 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
BckdkO55028 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
BckdkO55028 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
BckdkO55028 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
BckdkO55028 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BckdkO55028 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BckdkO55028 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BckdkO55028 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BckdkO55028 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BckdkO55028 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
BckdkO55028 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.99■□□□□ 0.95
BckdkO55028 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
BckdkO55028 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
BckdkO55028 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BckdkO55028 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
BckdkO55028 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.98■□□□□ 0.95
BckdkO55028 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BckdkO55028 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
BckdkO55028 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.97■□□□□ 0.95
BckdkO55028 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BckdkO55028 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BckdkO55028 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.96■□□□□ 0.95
BckdkO55028 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
BckdkO55028 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BckdkO55028 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BckdkO55028 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BckdkO55028 Gm4799-201ENSMUST00000095396 657 ntBASIC20.95■□□□□ 0.94
BckdkO55028 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.95■□□□□ 0.94
BckdkO55028 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BckdkO55028 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BckdkO55028 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
BckdkO55028 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BckdkO55028 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BckdkO55028 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
BckdkO55028 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
BckdkO55028 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BckdkO55028 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
BckdkO55028 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.94■□□□□ 0.94
BckdkO55028 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BckdkO55028 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BckdkO55028 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BckdkO55028 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BckdkO55028 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BckdkO55028 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BckdkO55028 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BckdkO55028 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BckdkO55028 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
BckdkO55028 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.92■□□□□ 0.94
BckdkO55028 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
BckdkO55028 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BckdkO55028 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BckdkO55028 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BckdkO55028 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.91■□□□□ 0.94
BckdkO55028 Gm37136-201ENSMUST00000194368 194 ntBASIC20.91■□□□□ 0.94
BckdkO55028 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BckdkO55028 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BckdkO55028 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms