Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm21788J3QNH3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm21788J3QNH3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Gm21788J3QNH3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm21788J3QNH3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm21788J3QNH3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm21788J3QNH3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm21788J3QNH3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.33■□□□□ 0.68
Gm21788J3QNH3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gm21788J3QNH3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gm21788J3QNH3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm21788J3QNH3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm21788J3QNH3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Gm21788J3QNH3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm21788J3QNH3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm21788J3QNH3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Gm21788J3QNH3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.32■□□□□ 0.68
Gm21788J3QNH3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm21788J3QNH3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm21788J3QNH3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.31■□□□□ 0.68
Gm21788J3QNH3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm21788J3QNH3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.31■□□□□ 0.68
Gm21788J3QNH3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm21788J3QNH3 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.31■□□□□ 0.68
Gm21788J3QNH3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm21788J3QNH3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm21788J3QNH3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm21788J3QNH3 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.3■□□□□ 0.68
Gm21788J3QNH3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm21788J3QNH3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm21788J3QNH3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm21788J3QNH3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm21788J3QNH3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm21788J3QNH3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm21788J3QNH3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm21788J3QNH3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Gm21788J3QNH3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm21788J3QNH3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm21788J3QNH3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm21788J3QNH3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.28■□□□□ 0.68
Gm21788J3QNH3 Gm37136-201ENSMUST00000194368 194 ntBASIC19.28■□□□□ 0.68
Gm21788J3QNH3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.28■□□□□ 0.68
Gm21788J3QNH3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm21788J3QNH3 Gm6821-201ENSMUST00000107540 542 ntBASIC19.27■□□□□ 0.68
Gm21788J3QNH3 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.27■□□□□ 0.68
Gm21788J3QNH3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm21788J3QNH3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm21788J3QNH3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm21788J3QNH3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm21788J3QNH3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm21788J3QNH3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Gm21788J3QNH3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm21788J3QNH3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.26■□□□□ 0.67
Gm21788J3QNH3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm21788J3QNH3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm21788J3QNH3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm21788J3QNH3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm21788J3QNH3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm21788J3QNH3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm21788J3QNH3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm21788J3QNH3 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.24■□□□□ 0.67
Gm21788J3QNH3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Gm21788J3QNH3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gm21788J3QNH3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm21788J3QNH3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm21788J3QNH3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm21788J3QNH3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gm21788J3QNH3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm21788J3QNH3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm21788J3QNH3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm21788J3QNH3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.22■□□□□ 0.67
Gm21788J3QNH3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm21788J3QNH3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm21788J3QNH3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm21788J3QNH3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm21788J3QNH3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm21788J3QNH3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Gm21788J3QNH3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gm21788J3QNH3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm21788J3QNH3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.2■□□□□ 0.66
Gm21788J3QNH3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm21788J3QNH3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm21788J3QNH3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gm21788J3QNH3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gm21788J3QNH3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm21788J3QNH3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.19■□□□□ 0.66
Gm21788J3QNH3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gm21788J3QNH3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gm21788J3QNH3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm21788J3QNH3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm21788J3QNH3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.18■□□□□ 0.66
Gm21788J3QNH3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm21788J3QNH3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gm21788J3QNH3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm21788J3QNH3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm21788J3QNH3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Gm21788J3QNH3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gm21788J3QNH3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm21788J3QNH3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gm21788J3QNH3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms