Protein–RNA interactions for Protein: E9Q4T4

Ccdc71l, Coiled-coil domain-containing 71-like, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71lE9Q4T4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Ccdc71lE9Q4T4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ccdc71lE9Q4T4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc71lE9Q4T4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc71lE9Q4T4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc71lE9Q4T4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc71lE9Q4T4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc71lE9Q4T4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc71lE9Q4T4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.96■□□□□ 0.47
Ccdc71lE9Q4T4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccdc71lE9Q4T4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc71lE9Q4T4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc71lE9Q4T4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc71lE9Q4T4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ccdc71lE9Q4T4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc71lE9Q4T4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ccdc71lE9Q4T4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc71lE9Q4T4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc71lE9Q4T4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc71lE9Q4T4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc71lE9Q4T4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc71lE9Q4T4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc71lE9Q4T4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc71lE9Q4T4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc71lE9Q4T4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc71lE9Q4T4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ccdc71lE9Q4T4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Ccdc71lE9Q4T4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.92■□□□□ 0.46
Ccdc71lE9Q4T4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.92■□□□□ 0.46
Ccdc71lE9Q4T4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc71lE9Q4T4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc71lE9Q4T4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc71lE9Q4T4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc71lE9Q4T4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc71lE9Q4T4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc71lE9Q4T4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc71lE9Q4T4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc71lE9Q4T4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.91■□□□□ 0.46
Ccdc71lE9Q4T4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc71lE9Q4T4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc71lE9Q4T4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc71lE9Q4T4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc71lE9Q4T4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc71lE9Q4T4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc71lE9Q4T4 Zfp131-205ENSMUST00000223812 663 ntBASIC17.9■□□□□ 0.46
Ccdc71lE9Q4T4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ccdc71lE9Q4T4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc71lE9Q4T4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc71lE9Q4T4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc71lE9Q4T4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc71lE9Q4T4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc71lE9Q4T4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc71lE9Q4T4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ccdc71lE9Q4T4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc71lE9Q4T4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Ccdc71lE9Q4T4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ccdc71lE9Q4T4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc71lE9Q4T4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc71lE9Q4T4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc71lE9Q4T4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc71lE9Q4T4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ccdc71lE9Q4T4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Ccdc71lE9Q4T4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc71lE9Q4T4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc71lE9Q4T4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.86■□□□□ 0.45
Ccdc71lE9Q4T4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc71lE9Q4T4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc71lE9Q4T4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ccdc71lE9Q4T4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Ccdc71lE9Q4T4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.85■□□□□ 0.45
Ccdc71lE9Q4T4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ccdc71lE9Q4T4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ccdc71lE9Q4T4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.84■□□□□ 0.45
Ccdc71lE9Q4T4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Ccdc71lE9Q4T4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.84■□□□□ 0.45
Ccdc71lE9Q4T4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.84■□□□□ 0.45
Ccdc71lE9Q4T4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ccdc71lE9Q4T4 Gm24970-201ENSMUST00000175582 82 ntBASIC17.83■□□□□ 0.44
Ccdc71lE9Q4T4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc71lE9Q4T4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Ccdc71lE9Q4T4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.83■□□□□ 0.44
Ccdc71lE9Q4T4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ccdc71lE9Q4T4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc71lE9Q4T4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc71lE9Q4T4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc71lE9Q4T4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.82■□□□□ 0.44
Ccdc71lE9Q4T4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc71lE9Q4T4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc71lE9Q4T4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc71lE9Q4T4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc71lE9Q4T4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc71lE9Q4T4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc71lE9Q4T4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc71lE9Q4T4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc71lE9Q4T4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc71lE9Q4T4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc71lE9Q4T4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc71lE9Q4T4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc71lE9Q4T4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc71lE9Q4T4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms