Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav23A0A0G2JG17 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.61■□□□□ 0.57
Trav23A0A0G2JG17 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trav23A0A0G2JG17 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav23A0A0G2JG17 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav23A0A0G2JG17 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.6■□□□□ 0.57
Trav23A0A0G2JG17 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav23A0A0G2JG17 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav23A0A0G2JG17 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav23A0A0G2JG17 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav23A0A0G2JG17 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav23A0A0G2JG17 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav23A0A0G2JG17 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.58■□□□□ 0.57
Trav23A0A0G2JG17 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.58■□□□□ 0.57
Trav23A0A0G2JG17 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Trav23A0A0G2JG17 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trav23A0A0G2JG17 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav23A0A0G2JG17 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav23A0A0G2JG17 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav23A0A0G2JG17 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trav23A0A0G2JG17 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav23A0A0G2JG17 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trav23A0A0G2JG17 Gm37136-201ENSMUST00000194368 194 ntBASIC18.56■□□□□ 0.56
Trav23A0A0G2JG17 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav23A0A0G2JG17 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trav23A0A0G2JG17 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav23A0A0G2JG17 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav23A0A0G2JG17 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trav23A0A0G2JG17 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav23A0A0G2JG17 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav23A0A0G2JG17 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav23A0A0G2JG17 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav23A0A0G2JG17 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav23A0A0G2JG17 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.54■□□□□ 0.56
Trav23A0A0G2JG17 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trav23A0A0G2JG17 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.53■□□□□ 0.56
Trav23A0A0G2JG17 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav23A0A0G2JG17 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav23A0A0G2JG17 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.53■□□□□ 0.56
Trav23A0A0G2JG17 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav23A0A0G2JG17 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav23A0A0G2JG17 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav23A0A0G2JG17 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav23A0A0G2JG17 Gm6311-201ENSMUST00000073790 878 ntBASIC18.52■□□□□ 0.56
Trav23A0A0G2JG17 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav23A0A0G2JG17 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav23A0A0G2JG17 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav23A0A0G2JG17 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav23A0A0G2JG17 Gm4799-201ENSMUST00000095396 657 ntBASIC18.51■□□□□ 0.55
Trav23A0A0G2JG17 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav23A0A0G2JG17 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav23A0A0G2JG17 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav23A0A0G2JG17 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav23A0A0G2JG17 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav23A0A0G2JG17 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav23A0A0G2JG17 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav23A0A0G2JG17 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav23A0A0G2JG17 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trav23A0A0G2JG17 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.5■□□□□ 0.55
Trav23A0A0G2JG17 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav23A0A0G2JG17 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav23A0A0G2JG17 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav23A0A0G2JG17 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav23A0A0G2JG17 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav23A0A0G2JG17 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav23A0A0G2JG17 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav23A0A0G2JG17 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Trav23A0A0G2JG17 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trav23A0A0G2JG17 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trav23A0A0G2JG17 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav23A0A0G2JG17 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav23A0A0G2JG17 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav23A0A0G2JG17 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav23A0A0G2JG17 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav23A0A0G2JG17 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav23A0A0G2JG17 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav23A0A0G2JG17 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav23A0A0G2JG17 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trav23A0A0G2JG17 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav23A0A0G2JG17 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.47■□□□□ 0.55
Trav23A0A0G2JG17 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav23A0A0G2JG17 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.46■□□□□ 0.55
Trav23A0A0G2JG17 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.46■□□□□ 0.55
Trav23A0A0G2JG17 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.46■□□□□ 0.55
Trav23A0A0G2JG17 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav23A0A0G2JG17 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav23A0A0G2JG17 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav23A0A0G2JG17 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav23A0A0G2JG17 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav23A0A0G2JG17 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav23A0A0G2JG17 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trav23A0A0G2JG17 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav23A0A0G2JG17 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Trav23A0A0G2JG17 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav23A0A0G2JG17 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.44■□□□□ 0.54
Trav23A0A0G2JG17 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav23A0A0G2JG17 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav23A0A0G2JG17 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav23A0A0G2JG17 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav23A0A0G2JG17 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms