Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav23A0A0G2JG17 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.61■□□□□ 0.57
Trav23A0A0G2JG17 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Trav23A0A0G2JG17 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav23A0A0G2JG17 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav23A0A0G2JG17 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.6■□□□□ 0.57
Trav23A0A0G2JG17 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav23A0A0G2JG17 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav23A0A0G2JG17 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav23A0A0G2JG17 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav23A0A0G2JG17 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav23A0A0G2JG17 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav23A0A0G2JG17 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.58■□□□□ 0.57
Trav23A0A0G2JG17 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.58■□□□□ 0.57
Trav23A0A0G2JG17 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Trav23A0A0G2JG17 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trav23A0A0G2JG17 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav23A0A0G2JG17 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav23A0A0G2JG17 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav23A0A0G2JG17 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Trav23A0A0G2JG17 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav23A0A0G2JG17 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trav23A0A0G2JG17 Gm37136-201ENSMUST00000194368 194 ntBASIC18.56■□□□□ 0.56
Trav23A0A0G2JG17 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav23A0A0G2JG17 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trav23A0A0G2JG17 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trav23A0A0G2JG17 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav23A0A0G2JG17 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trav23A0A0G2JG17 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav23A0A0G2JG17 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav23A0A0G2JG17 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav23A0A0G2JG17 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav23A0A0G2JG17 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav23A0A0G2JG17 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.54■□□□□ 0.56
Trav23A0A0G2JG17 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trav23A0A0G2JG17 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.53■□□□□ 0.56
Trav23A0A0G2JG17 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav23A0A0G2JG17 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav23A0A0G2JG17 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.53■□□□□ 0.56
Trav23A0A0G2JG17 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav23A0A0G2JG17 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav23A0A0G2JG17 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav23A0A0G2JG17 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trav23A0A0G2JG17 Gm6311-201ENSMUST00000073790 878 ntBASIC18.52■□□□□ 0.56
Trav23A0A0G2JG17 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav23A0A0G2JG17 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav23A0A0G2JG17 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav23A0A0G2JG17 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav23A0A0G2JG17 Gm4799-201ENSMUST00000095396 657 ntBASIC18.51■□□□□ 0.55
Trav23A0A0G2JG17 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav23A0A0G2JG17 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav23A0A0G2JG17 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav23A0A0G2JG17 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav23A0A0G2JG17 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav23A0A0G2JG17 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav23A0A0G2JG17 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav23A0A0G2JG17 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav23A0A0G2JG17 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trav23A0A0G2JG17 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.5■□□□□ 0.55
Trav23A0A0G2JG17 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav23A0A0G2JG17 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav23A0A0G2JG17 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav23A0A0G2JG17 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav23A0A0G2JG17 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav23A0A0G2JG17 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav23A0A0G2JG17 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav23A0A0G2JG17 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Trav23A0A0G2JG17 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trav23A0A0G2JG17 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trav23A0A0G2JG17 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav23A0A0G2JG17 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav23A0A0G2JG17 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav23A0A0G2JG17 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav23A0A0G2JG17 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav23A0A0G2JG17 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav23A0A0G2JG17 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav23A0A0G2JG17 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav23A0A0G2JG17 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trav23A0A0G2JG17 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav23A0A0G2JG17 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.47■□□□□ 0.55
Trav23A0A0G2JG17 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav23A0A0G2JG17 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.46■□□□□ 0.55
Trav23A0A0G2JG17 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.46■□□□□ 0.55
Trav23A0A0G2JG17 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.46■□□□□ 0.55
Trav23A0A0G2JG17 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav23A0A0G2JG17 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav23A0A0G2JG17 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav23A0A0G2JG17 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav23A0A0G2JG17 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav23A0A0G2JG17 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav23A0A0G2JG17 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trav23A0A0G2JG17 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav23A0A0G2JG17 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Trav23A0A0G2JG17 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav23A0A0G2JG17 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.44■□□□□ 0.54
Trav23A0A0G2JG17 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav23A0A0G2JG17 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav23A0A0G2JG17 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav23A0A0G2JG17 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav23A0A0G2JG17 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 133.1 ms