Protein–RNA interactions for Protein: A0A0A6YXT2

Ighv1-36, Immunoglobulin heavy variable 1-36 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-36A0A0A6YXT2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ighv1-36A0A0A6YXT2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-36A0A0A6YXT2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-36A0A0A6YXT2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv1-36A0A0A6YXT2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv1-36A0A0A6YXT2 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.65■□□□□ 0.58
Ighv1-36A0A0A6YXT2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ighv1-36A0A0A6YXT2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-36A0A0A6YXT2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.64■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.63■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.61■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.61■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.61■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.59■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv1-36A0A0A6YXT2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.57■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Gm37136-201ENSMUST00000194368 194 ntBASIC18.55■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.53■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.52■□□□□ 0.56
Ighv1-36A0A0A6YXT2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-36A0A0A6YXT2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Ighv1-36A0A0A6YXT2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.51■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.51■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.51■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.49■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.49■□□□□ 0.55
Ighv1-36A0A0A6YXT2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-36A0A0A6YXT2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.49■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.47■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.47■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.47■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.46■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-36A0A0A6YXT2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-36A0A0A6YXT2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ighv1-36A0A0A6YXT2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.45■□□□□ 0.54
Ighv1-36A0A0A6YXT2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms