Protein–RNA interactions for Protein: A0A087WP44

Gm28897, Predicted gene 28827, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28897A0A087WP44 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm28897A0A087WP44 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm28897A0A087WP44 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm28897A0A087WP44 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm28897A0A087WP44 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.22■□□□□ 0.83
Gm28897A0A087WP44 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm28897A0A087WP44 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm28897A0A087WP44 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Gm28897A0A087WP44 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm28897A0A087WP44 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28897A0A087WP44 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28897A0A087WP44 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Gm28897A0A087WP44 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.21■□□□□ 0.83
Gm28897A0A087WP44 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28897A0A087WP44 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28897A0A087WP44 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Gm28897A0A087WP44 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28897A0A087WP44 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm28897A0A087WP44 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm28897A0A087WP44 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm28897A0A087WP44 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm28897A0A087WP44 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.2■□□□□ 0.82
Gm28897A0A087WP44 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm28897A0A087WP44 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm28897A0A087WP44 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.19■□□□□ 0.82
Gm28897A0A087WP44 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm28897A0A087WP44 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm28897A0A087WP44 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm28897A0A087WP44 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Gm28897A0A087WP44 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Gm28897A0A087WP44 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.18■□□□□ 0.82
Gm28897A0A087WP44 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Gm28897A0A087WP44 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm28897A0A087WP44 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Gm28897A0A087WP44 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm28897A0A087WP44 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm28897A0A087WP44 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm28897A0A087WP44 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Gm28897A0A087WP44 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Gm28897A0A087WP44 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm28897A0A087WP44 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm28897A0A087WP44 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm28897A0A087WP44 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm28897A0A087WP44 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.13■□□□□ 0.81
Gm28897A0A087WP44 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm28897A0A087WP44 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28897A0A087WP44 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28897A0A087WP44 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28897A0A087WP44 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28897A0A087WP44 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28897A0A087WP44 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28897A0A087WP44 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.11■□□□□ 0.81
Gm28897A0A087WP44 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28897A0A087WP44 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28897A0A087WP44 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28897A0A087WP44 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28897A0A087WP44 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm28897A0A087WP44 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm28897A0A087WP44 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Gm28897A0A087WP44 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Gm28897A0A087WP44 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm28897A0A087WP44 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Gm28897A0A087WP44 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm28897A0A087WP44 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28897A0A087WP44 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Gm28897A0A087WP44 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28897A0A087WP44 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28897A0A087WP44 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28897A0A087WP44 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28897A0A087WP44 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28897A0A087WP44 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28897A0A087WP44 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28897A0A087WP44 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28897A0A087WP44 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28897A0A087WP44 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Gm28897A0A087WP44 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Gm28897A0A087WP44 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28897A0A087WP44 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Gm28897A0A087WP44 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28897A0A087WP44 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Gm28897A0A087WP44 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Gm28897A0A087WP44 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Gm28897A0A087WP44 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Gm28897A0A087WP44 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Gm28897A0A087WP44 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm28897A0A087WP44 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm28897A0A087WP44 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm28897A0A087WP44 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.02■□□□□ 0.8
Gm28897A0A087WP44 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm28897A0A087WP44 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm28897A0A087WP44 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gm28897A0A087WP44 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gm28897A0A087WP44 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gm28897A0A087WP44 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28897A0A087WP44 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Gm28897A0A087WP44 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28897A0A087WP44 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28897A0A087WP44 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28897A0A087WP44 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28897A0A087WP44 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 132.5 ms