Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav14n-3A0A075B645 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trav14n-3A0A075B645 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav14n-3A0A075B645 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav14n-3A0A075B645 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav14n-3A0A075B645 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav14n-3A0A075B645 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trav14n-3A0A075B645 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
Trav14n-3A0A075B645 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav14n-3A0A075B645 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav14n-3A0A075B645 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav14n-3A0A075B645 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav14n-3A0A075B645 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav14n-3A0A075B645 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav14n-3A0A075B645 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav14n-3A0A075B645 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trav14n-3A0A075B645 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.35■□□□□ 0.37
Trav14n-3A0A075B645 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav14n-3A0A075B645 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav14n-3A0A075B645 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav14n-3A0A075B645 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav14n-3A0A075B645 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav14n-3A0A075B645 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav14n-3A0A075B645 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav14n-3A0A075B645 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav14n-3A0A075B645 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Trav14n-3A0A075B645 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav14n-3A0A075B645 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav14n-3A0A075B645 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trav14n-3A0A075B645 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav14n-3A0A075B645 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav14n-3A0A075B645 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav14n-3A0A075B645 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav14n-3A0A075B645 Gm26115-201ENSMUST00000175605 87 ntBASIC17.31■□□□□ 0.36
Trav14n-3A0A075B645 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav14n-3A0A075B645 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav14n-3A0A075B645 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav14n-3A0A075B645 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trav14n-3A0A075B645 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav14n-3A0A075B645 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav14n-3A0A075B645 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.3■□□□□ 0.36
Trav14n-3A0A075B645 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav14n-3A0A075B645 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav14n-3A0A075B645 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav14n-3A0A075B645 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trav14n-3A0A075B645 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav14n-3A0A075B645 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav14n-3A0A075B645 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav14n-3A0A075B645 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.27■□□□□ 0.36
Trav14n-3A0A075B645 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav14n-3A0A075B645 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.27■□□□□ 0.36
Trav14n-3A0A075B645 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.27■□□□□ 0.36
Trav14n-3A0A075B645 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Trav14n-3A0A075B645 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.27■□□□□ 0.36
Trav14n-3A0A075B645 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.27■□□□□ 0.35
Trav14n-3A0A075B645 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trav14n-3A0A075B645 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trav14n-3A0A075B645 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav14n-3A0A075B645 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav14n-3A0A075B645 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav14n-3A0A075B645 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav14n-3A0A075B645 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav14n-3A0A075B645 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trav14n-3A0A075B645 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav14n-3A0A075B645 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav14n-3A0A075B645 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav14n-3A0A075B645 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav14n-3A0A075B645 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav14n-3A0A075B645 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav14n-3A0A075B645 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav14n-3A0A075B645 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav14n-3A0A075B645 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav14n-3A0A075B645 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav14n-3A0A075B645 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Trav14n-3A0A075B645 Particl-201ENSMUST00000205370 1560 ntBASIC17.24■□□□□ 0.35
Trav14n-3A0A075B645 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav14n-3A0A075B645 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav14n-3A0A075B645 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav14n-3A0A075B645 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav14n-3A0A075B645 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trav14n-3A0A075B645 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav14n-3A0A075B645 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav14n-3A0A075B645 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.23■□□□□ 0.35
Trav14n-3A0A075B645 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav14n-3A0A075B645 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.23■□□□□ 0.35
Trav14n-3A0A075B645 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav14n-3A0A075B645 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav14n-3A0A075B645 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav14n-3A0A075B645 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav14n-3A0A075B645 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.22■□□□□ 0.35
Trav14n-3A0A075B645 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Trav14n-3A0A075B645 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav14n-3A0A075B645 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav14n-3A0A075B645 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav14n-3A0A075B645 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav14n-3A0A075B645 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav14n-3A0A075B645 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav14n-3A0A075B645 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.21■□□□□ 0.35
Trav14n-3A0A075B645 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav14n-3A0A075B645 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms