Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.72■□□□□ 0.91
Trav12n-2A0A075B626 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav12n-2A0A075B626 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav12n-2A0A075B626 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav12n-2A0A075B626 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.7■□□□□ 0.9
Trav12n-2A0A075B626 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trav12n-2A0A075B626 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav12n-2A0A075B626 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav12n-2A0A075B626 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav12n-2A0A075B626 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav12n-2A0A075B626 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Trav12n-2A0A075B626 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Trav12n-2A0A075B626 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trav12n-2A0A075B626 Gm45364-201ENSMUST00000210883 159 ntBASIC20.68■□□□□ 0.9
Trav12n-2A0A075B626 Gm6311-201ENSMUST00000073790 878 ntBASIC20.68■□□□□ 0.9
Trav12n-2A0A075B626 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav12n-2A0A075B626 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav12n-2A0A075B626 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.67■□□□□ 0.9
Trav12n-2A0A075B626 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.67■□□□□ 0.9
Trav12n-2A0A075B626 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav12n-2A0A075B626 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav12n-2A0A075B626 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav12n-2A0A075B626 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.66■□□□□ 0.9
Trav12n-2A0A075B626 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav12n-2A0A075B626 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav12n-2A0A075B626 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav12n-2A0A075B626 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trav12n-2A0A075B626 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav12n-2A0A075B626 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav12n-2A0A075B626 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.65■□□□□ 0.9
Trav12n-2A0A075B626 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Trav12n-2A0A075B626 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav12n-2A0A075B626 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav12n-2A0A075B626 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav12n-2A0A075B626 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.64■□□□□ 0.9
Trav12n-2A0A075B626 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav12n-2A0A075B626 Gm9812-201ENSMUST00000061934 968 ntBASIC20.64■□□□□ 0.89
Trav12n-2A0A075B626 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.63■□□□□ 0.89
Trav12n-2A0A075B626 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav12n-2A0A075B626 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav12n-2A0A075B626 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav12n-2A0A075B626 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav12n-2A0A075B626 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.62■□□□□ 0.89
Trav12n-2A0A075B626 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav12n-2A0A075B626 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav12n-2A0A075B626 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav12n-2A0A075B626 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trav12n-2A0A075B626 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav12n-2A0A075B626 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.6■□□□□ 0.89
Trav12n-2A0A075B626 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.6■□□□□ 0.89
Trav12n-2A0A075B626 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav12n-2A0A075B626 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav12n-2A0A075B626 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Trav12n-2A0A075B626 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav12n-2A0A075B626 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.59■□□□□ 0.89
Trav12n-2A0A075B626 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav12n-2A0A075B626 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trav12n-2A0A075B626 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav12n-2A0A075B626 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trav12n-2A0A075B626 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trav12n-2A0A075B626 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav12n-2A0A075B626 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Trav12n-2A0A075B626 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trav12n-2A0A075B626 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav12n-2A0A075B626 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trav12n-2A0A075B626 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav12n-2A0A075B626 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav12n-2A0A075B626 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav12n-2A0A075B626 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trav12n-2A0A075B626 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav12n-2A0A075B626 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav12n-2A0A075B626 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trav12n-2A0A075B626 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav12n-2A0A075B626 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trav12n-2A0A075B626 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Trav12n-2A0A075B626 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.55■□□□□ 0.88
Trav12n-2A0A075B626 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav12n-2A0A075B626 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Trav12n-2A0A075B626 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav12n-2A0A075B626 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trav12n-2A0A075B626 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav12n-2A0A075B626 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav12n-2A0A075B626 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav12n-2A0A075B626 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav12n-2A0A075B626 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav12n-2A0A075B626 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav12n-2A0A075B626 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Trav12n-2A0A075B626 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav12n-2A0A075B626 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.52■□□□□ 0.88
Trav12n-2A0A075B626 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trav12n-2A0A075B626 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav12n-2A0A075B626 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav12n-2A0A075B626 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.51■□□□□ 0.87
Trav12n-2A0A075B626 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav12n-2A0A075B626 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav12n-2A0A075B626 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav12n-2A0A075B626 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.5■□□□□ 0.87
Trav12n-2A0A075B626 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav12n-2A0A075B626 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav12n-2A0A075B626 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms