RNA–Protein interactions for RNA: ENST00000486796.1

CLASP2-217, Transcript of cytoplasmic linker associated protein 2, humanhuman


Gene CLASP2, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP2-217ENST00000486796 SF3B1O75533 1304 aaKnown RBP eCLIP16.94■□□□□ 0.38e-10■■■■■ 160.8
CLASP2-217ENST00000486796 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21■□□□□ 0.951e-19■■■■■ 65
CLASP2-217ENST00000486796 TARDBPQ13148 414 aaKnown RBP eCLIP15.25■□□□□ 0.034e-9■■■■■ 32
CLASP2-217ENST00000486796 PTBP1P26599 531 aaKnown RBP eCLIP12.43□□□□□ -0.422e-16■■■■■ 31.8
CLASP2-217ENST00000486796 MATR3P43243 847 aaKnown RBP eCLIP17.12■□□□□ 0.332e-6■■■■■ 31.3
CLASP2-217ENST00000486796 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.72□□□□□ -0.372e-6■■■□□ 18.8
CLASP2-217ENST00000486796 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.21□□□□□ -0.293e-7■■■□□ 17.2
CLASP2-217ENST00000486796 KHSRPQ92945 711 aaKnown RBP eCLIP16.46■□□□□ 0.231e-6■■□□□ 14.5
CLASP2-217ENST00000486796 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.61■■□□□ 1.376e-9■■□□□ 11.5
CLASP2-217ENST00000486796 ZNF622Q969S3 477 aaKnown RBP eCLIP19.85■□□□□ 0.778e-21■□□□□ 11
CLASP2-217ENST00000486796 PPIGQ13427 754 aaKnown RBP eCLIP17.49■□□□□ 0.394e-10■□□□□ 9.6
Retrieved 11 of 11 RNA–protein pairs in 4.9 ms