RNA–Protein interactions for RNA: ENST00000486796.1

CLASP2-217, Transcript of cytoplasmic linker associated protein 2, human

TSL 2

Gene CLASP2, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLASP2-217	ENST00000486796	SF3B1	O75533	1304 aa	Known RBP eCLIP	16.94	■□□□□ 0.3	8e-10	■■■■■ 160.8
CLASP2-217	ENST00000486796	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	21	■□□□□ 0.95	1e-19	■■■■■ 65
CLASP2-217	ENST00000486796	TARDBP	Q13148	414 aa	Known RBP eCLIP	15.25	■□□□□ 0.03	4e-9	■■■■■ 32
CLASP2-217	ENST00000486796	PTBP1	P26599	531 aa	Known RBP eCLIP	12.43	□□□□□ -0.42	2e-16	■■■■■ 31.8
CLASP2-217	ENST00000486796	MATR3	P43243	847 aa	Known RBP eCLIP	17.12	■□□□□ 0.33	2e-6	■■■■■ 31.3
CLASP2-217	ENST00000486796	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	12.72	□□□□□ -0.37	2e-6	■■■□□ 18.8
CLASP2-217	ENST00000486796	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.21	□□□□□ -0.29	3e-7	■■■□□ 17.2
CLASP2-217	ENST00000486796	KHSRP	Q92945	711 aa	Known RBP eCLIP	16.46	■□□□□ 0.23	1e-6	■■□□□ 14.5
CLASP2-217	ENST00000486796	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	23.61	■■□□□ 1.37	6e-9	■■□□□ 11.5
CLASP2-217	ENST00000486796	ZNF622	Q969S3	477 aa	Known RBP eCLIP	19.85	■□□□□ 0.77	8e-21	■□□□□ 11
CLASP2-217	ENST00000486796	PPIG	Q13427	754 aa	Known RBP eCLIP	17.49	■□□□□ 0.39	4e-10	■□□□□ 9.6

Retrieved 11 of 11 RNA–protein pairs in 4.5 ms