RNA–Protein interactions for RNA: ENST00000373568.6

HDAC8-205, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-205ENST00000373568 SF3A3Q12874 501 aaKnown RBP eCLIP11.98□□□□□ -0.491e-323■■■■■ 83.9
HDAC8-205ENST00000373568 SF3B4Q15427 424 aaKnown RBP eCLIP11.84□□□□□ -0.514e-73■■■■■ 236.6
HDAC8-205ENST00000373568 GPKOWQ92917 476 aaPredicted RBP eCLIP15.21■□□□□ 0.031e-19■■■■■ 59.4
HDAC8-205ENST00000373568 SMNDC1O75940 238 aaKnown RBP eCLIP11.7□□□□□ -0.541e-16■■■■■ 35
HDAC8-205ENST00000373568 PCBP2Q15366 365 aaKnown RBP eCLIP12.53□□□□□ -0.41e-8■■■■■ 36
HDAC8-205ENST00000373568 PTBP1P26599 531 aaKnown RBP eCLIP10.27□□□□□ -0.776e-8■■■■■ 40
HDAC8-205ENST00000373568 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.08□□□□□ -0.168e-7■■■■■ 271.7
HDAC8-205ENST00000373568 QKIQ96PU8 341 aaKnown RBP eCLIP13.28□□□□□ -0.281e-6■■■■□ 21.3
HDAC8-205ENST00000373568 LARP4Q71RC2 724 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■■□□ 19.2
HDAC8-205ENST00000373568 SF3B1O75533 1304 aaKnown RBP eCLIP14.3□□□□□ -0.122e-6■■■■■ 101.5
HDAC8-205ENST00000373568 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.64□□□□□ -0.392e-6■■■■■ 46.8
HDAC8-205ENST00000373568 AARSP49588 968 aaKnown RBP eCLIP14.28□□□□□ -0.123e-6■■■■■ 61.8
HDAC8-205ENST00000373568 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.81□□□□□ -0.044e-6■■■□□ 15.2
HDAC8-205ENST00000373568 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.78■□□□□ 0.445e-6■■□□□ 11.8
HDAC8-205ENST00000373568 NSUN2Q08J23 767 aaKnown RBP eCLIP13.34□□□□□ -0.271e-5■■■■□ 24.6
Retrieved 15 of 15 RNA–protein pairs in 812.9 ms