RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 TMEM161AQ9NX61 479 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 SLCO1C1Q9NYB5 712 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 B3GAT1Q9P2W7 334 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 ZNF804BA4D1E1 1349 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 PDS5AQ29RF7 1337 aaKnown RBP4.84□□□□□ -1.63
LINC00397-202ENST00000606785 IGLV5-52A0A0A0MRZ9 124 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 A0A1W2PPK0 400 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 KCNJ13O60928 360 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 SEC22BO75396 215 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 AKAP3O75969 853 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 H1F0P07305 194 aaKnown RBP4.84□□□□□ -1.63
LINC00397-202ENST00000606785 SMIM18P0DKX4 95 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 GAP43P17677 238 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 SLC6A6P31641 620 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 CTNNB1P35222 781 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 MMP15P51511 669 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 SLC12A3P55017 1021 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 BRWD1-AS2P59051 145 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 STARD6P59095 220 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 IL1RL1Q01638 556 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 BNC1Q01954 994 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 RABEP1Q15276 862 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 NPTX1Q15818 432 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 CALCRLQ16602 461 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 SETMARQ53H47 684 aaPredicted RBP4.84□□□□□ -1.63
LINC00397-202ENST00000606785 LACTB2Q53H82 288 aaPredicted RBP4.84□□□□□ -1.63
LINC00397-202ENST00000606785 PLEKHM3Q6ZWE6 761 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 PIM3Q86V86 326 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 PTOV1Q86YD1 416 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 ERC1Q8IUD2 1116 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 L3MBTL4Q8NA19 623 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 NCOA7Q8NI08 942 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 RNF128Q8TEB7 428 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 FAM216AQ8WUB2 273 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 SPXQ9BT56 116 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 SPRTNQ9H040 489 aaPredicted RBP4.84□□□□□ -1.63
LINC00397-202ENST00000606785 LSG1Q9H089 658 aaKnown RBP4.84□□□□□ -1.63
LINC00397-202ENST00000606785 SRD5A3Q9H8P0 318 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 ACKR4Q9NPB9 350 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 HIF1ANQ9NWT6 349 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 CYP39A1Q9NYL5 469 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 SMARCAL1Q9NZC9 954 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 TXNDC16Q9P2K2 825 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 LRWD1Q9UFC0 647 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 IL19Q9UHD0 177 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 SIX4Q9UIU6 781 aa4.84□□□□□ -1.63
LINC00397-202ENST00000606785 ZCWPW2A0A1B0GU75 182 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 C13orf42A0A1B0GVH6 325 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 PRR32B1ATL7 298 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 FLRT2O43155 660 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 TTI1O43156 1089 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 ZNHIT1O43257 154 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 KDM4BO94953 1096 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 PLGP00747 810 aaPredicted RBP4.83□□□□□ -1.64
LINC00397-202ENST00000606785 C9P02748 559 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 FAM106CPP0CH98 169 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 C8orf89P0DMQ9 161 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 HAPLN1P10915 354 aaPredicted RBP4.83□□□□□ -1.64
LINC00397-202ENST00000606785 PSG1P11464 419 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 CSF2RAP15509 400 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 GM2AP17900 193 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 VCLP18206 1134 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 GSDMDP57764 484 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 TRAF2Q12933 501 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 VEZF1Q14119 521 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 SGCBQ16585 318 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 CTU2Q2VPK5 515 aaKnown RBP4.83□□□□□ -1.64
LINC00397-202ENST00000606785 KRTAP15-1Q3LI76 137 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 MCMDC2Q4G0Z9 681 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 AARDQ4LEZ3 155 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.83□□□□□ -1.64
LINC00397-202ENST00000606785 C11orf63Q6NUN7 778 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 CYB5D1Q6P9G0 228 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 RAD9BQ6WBX8 426 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 PIGWQ7Z7B1 504 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 FJX1Q86VR8 437 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 ZNF575Q86XF7 245 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 CCDC83Q8IWF9 413 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 RYBPQ8N488 228 aaPredicted RBP4.83□□□□□ -1.64
LINC00397-202ENST00000606785 CPSF7Q8N684 471 aaKnown RBP4.83□□□□□ -1.64
LINC00397-202ENST00000606785 AMER3Q8N944 861 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 THAP8Q8NA92 274 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 RDM1Q8NG50 284 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 ST7LQ8TDW4 575 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 SLC20A1Q8WUM9 679 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 CCDC107Q8WV48 283 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 UBLCP1Q8WVY7 318 aaPredicted RBP4.83□□□□□ -1.64
LINC00397-202ENST00000606785 PROX1Q92786 737 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 SGF29Q96ES7 293 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 SCMH1Q96GD3 660 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 MYADMQ96S97 322 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 VN1R1Q9GZP7 353 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 ANO10Q9NW15 660 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 COMMD8Q9NX08 183 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 SPG21Q9NZD8 308 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 ZNF224Q9NZL3 707 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 C11orf21Q9P2W6 132 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 FBXW2Q9UKT8 454 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 OR2W1Q9Y3N9 320 aa4.83□□□□□ -1.64
LINC00397-202ENST00000606785 HEG1Q9ULI3 1381 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms