RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	PYCR3	Q53H96	274 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	MEDAG	Q5VYS4	303 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	LRRC66	Q68CR7	880 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	TAPT1	Q6NXT6	567 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	METAP1D	Q6UB28	335 aa	Predicted RBP	11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ARHGAP36	Q6ZRI8	547 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	C14orf80	Q86SX3	495 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	MICALL2	Q8IY33	904 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	TCTE3	Q8IZS6	198 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CACTIN-AS1	Q8N1I8	211 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	METTL4	Q8N3J2	472 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PARP16	Q8N5Y8	322 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	GDPD1	Q8N9F7	314 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ARRDC2	Q8TBH0	407 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CSGALNACT1	Q8TDX6	532 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CAPSL	Q8WWF8	208 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SLC39A13	Q96H72	371 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CEP19	Q96LK0	163 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PPM1M	Q96MI6	270 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236		Q96MT0	163 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	TRNT1	Q96Q11	434 aa	Known RBP	11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	HHIP	Q96QV1	700 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SLC30A2	Q9BRI3	323 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	COPS4	Q9BT78	406 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	TP63	Q9H3D4	680 aa	Predicted RBP	11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SMURF2	Q9HAU4	748 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SEMA4B	Q9NPR2	832 aa	Predicted RBP	11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ABCB10	Q9NRK6	738 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CD274	Q9NZQ7	290 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	MPP6	Q9NZW5	540 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PIM2	Q9P1W9	311 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	KIF17	Q9P2E2	1029 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ERVK-18	Q9QC07	812 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	UXT	Q9UBK9	157 aa	Predicted RBP	11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	POFUT2	Q9Y2G5	429 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PADI2	Q9Y2J8	665 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	COL4A5	P29400	1685 aa		11.49	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	BTN3A1	O00481	513 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PRAMEF11	O60813	436 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	RAMP2	O60895	175 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ULK1	O75385	1050 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CNMD	O75829	334 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	BEST1	O76090	585 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	FTH1	P02794	183 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	TH	P07101	528 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SRPRA	P08240	638 aa	Known RBP	11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	MMP2	P08253	660 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	G6PD	P11413	515 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	LPO	P22079	712 aa	Predicted RBP	11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	GGT2	P36268	569 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CASP2	P42575	452 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	VBP1	P61758	197 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	RHAG	Q02094	409 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ASAH1	Q13510	395 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	GPR50	Q13585	617 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	BOP1	Q14137	746 aa	Known RBP	11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	E2F2	Q14209	437 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SF3B4	Q15427	424 aa	Known RBP eCLIP	11.48	□□□□□ -0.57	4e-9	■■■■■ 43.7
U2AF1L4-221	ENST00000601236	ZNF792	Q3KQV3	632 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	C5orf22	Q49AR2	442 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ZNF789	Q5FWF6	425 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	LDLRAP1	Q5SW96	308 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	FAM182B	Q5T319	152 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	PAQR3	Q6TCH7	311 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	IL27RA	Q6UWB1	636 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CBLL1	Q75N03	491 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	MILR1	Q7Z6M3	343 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SLC44A2	Q8IWA5	706 aa	Predicted RBP	11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	FBXO16	Q8IX29	292 aa	Predicted RBP	11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CHPF	Q8IZ52	775 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CDYL2	Q8N8U2	506 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	FAM181A	Q8N9Y4	354 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	OR9Q1	Q8NGQ5	310 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	OR10A6	Q8NH74	314 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	USP7	Q93009	1102 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	DHRS1	Q96LJ7	313 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	TBATA	Q96M53	351 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	MAPKAP1	Q9BPZ7	522 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	EMILIN2	Q9BXX0	1053 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ADGRE3	Q9BY15	652 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SLC22A4	Q9H015	551 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	MAGEH1	Q9H213	219 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ACTL8	Q9H568	366 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	NT5M	Q9NPB1	228 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	AASDHPPT	Q9NRN7	309 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	FAM120C	Q9NX05	1096 aa	Known RBP	11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	EHD3	Q9NZN3	535 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	STOML2	Q9UJZ1	356 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	POU2F3	Q9UKI9	436 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	SCML2	Q9UQR0	700 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	DHRS7	Q9Y394	339 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	CCL27	Q9Y4X3	112 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	OARD1	Q9Y530	152 aa		11.48	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	IQCM	A0A1B0GVH7	501 aa		11.47	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	IRGM	A1A4Y4	181 aa		11.47	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	NOTO	A8MTQ0	251 aa		11.47	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	FZD9	O00144	591 aa		11.47	□□□□□ -0.57
U2AF1L4-221	ENST00000601236	TBX1	O43435	398 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms