RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 DIRAS2Q96HU8 199 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 RDH12Q96NR8 316 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 MTERF1Q99551 399 aaKnown RBP10.32□□□□□ -0.76
USB1-212ENST00000566082 SMOC2Q9H3U7 446 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 R3HDMLQ9H3Y0 253 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.32□□□□□ -0.76
USB1-212ENST00000566082 DKK3Q9UBP4 350 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 PCDHB8Q9UN66 801 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 RNF6Q9Y252 685 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 ZNF451Q9Y4E5 1061 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 ZFP37Q9Y6Q3 630 aaPredicted RBP10.32□□□□□ -0.76
USB1-212ENST00000566082 LOC730098B7Z3J9 87 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 PRR23D1E9PI22 279 aaPredicted RBP10.31□□□□□ -0.76
USB1-212ENST00000566082 PRR23D2P0DMB1 279 aaPredicted RBP10.31□□□□□ -0.76
USB1-212ENST00000566082 ARCN1P48444 511 aaKnown RBP10.31□□□□□ -0.76
USB1-212ENST00000566082 MVKQ03426 396 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 FPGSQ05932 587 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 CLCA4Q14CN2 919 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 TAF1AQ15573 450 aaPredicted RBP10.31□□□□□ -0.76
USB1-212ENST00000566082 TPGS1Q6ZTW0 290 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 ZFAND4Q86XD8 727 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 ZBTB2Q8N680 514 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 TMEM40Q8WWA1 233 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 NMUR1Q9HB89 426 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 CD300AQ9UGN4 299 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 DYRK1BQ9Y463 629 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 PCDHGA11Q9Y5H2 935 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 CCRL2O00421 344 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 PLK4O00444 970 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 SERPINI2O75830 405 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 CRHBPP24387 322 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 NR4A2P43354 598 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 SRP54P61011 504 aaKnown RBP10.31□□□□□ -0.76
USB1-212ENST00000566082 NFKB2Q00653 900 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 SMARCB1Q12824 385 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 KANK2Q63ZY3 851 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 PELI3Q8N2H9 469 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 OR13J1Q8NGT2 312 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 CHPT1Q8WUD6 406 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 ISL2Q96A47 359 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 MAELQ96JY0 434 aaKnown RBP10.31□□□□□ -0.76
USB1-212ENST00000566082 RBM38Q9H0Z9 239 aaKnown RBP10.31□□□□□ -0.76
USB1-212ENST00000566082 TNFRSF12AQ9NP84 129 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 C14orf119Q9NWQ9 140 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 ATP6V1HQ9UI12 483 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 TLR6Q9Y2C9 796 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 PCDHB7Q9Y5E2 793 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 ARFGEF1Q9Y6D6 1849 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 FAM240BA0A1B0GVZ2 78 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 ILVBLA1L0T0 632 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 SNTNA6NMZ2 147 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 STX16O14662 325 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 TBL1XO60907 577 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 ENGP17813 658 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 FDXRP22570 491 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 GSTM5P46439 218 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 ARPC4P59998 168 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 CACNG1Q06432 222 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 CHIT1Q13231 466 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 PLD1Q13393 1074 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 RCAN2Q14206 197 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 SPATS1Q496A3 300 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 RFTN2Q52LD8 501 aaPredicted RBP10.31□□□□□ -0.76
USB1-212ENST00000566082 MS4A13Q5J8X5 152 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 HECTD3Q5T447 861 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 ATXN7L2Q5T6C5 722 aaPredicted RBP10.31□□□□□ -0.76
USB1-212ENST00000566082 ERICH5Q6P6B1 374 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 CERS6Q6ZMG9 384 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 IPCEF1Q8WWN9 437 aaPredicted RBP10.31□□□□□ -0.76
USB1-212ENST00000566082 GFM1Q96RP9 751 aaKnown RBP10.31□□□□□ -0.76
USB1-212ENST00000566082 IL4I1Q96RQ9 567 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 NEK6Q9HC98 313 aa10.31□□□□□ -0.76
USB1-212ENST00000566082 THUMPD1Q9NXG2 353 aaKnown RBP10.31□□□□□ -0.76
USB1-212ENST00000566082 ANKDD1BA6NHY2 528 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 PLOD3O60568 738 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 PSIP1O75475 530 aaKnown RBP10.3□□□□□ -0.76
USB1-212ENST00000566082 NPPAP01160 153 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 LCKP06239 509 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 FGF4P08620 206 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 ITGA2P17301 1181 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 ABRAXAS2Q15018 415 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 C18orf21Q32NC0 220 aaPredicted RBP10.3□□□□□ -0.76
USB1-212ENST00000566082 CCBE1Q6UXH8 406 aaPredicted RBP10.3□□□□□ -0.76
USB1-212ENST00000566082 C11orf65Q8NCR3 313 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 OR4A15Q8NGL6 344 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 FCGR1BQ92637 280 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 POP5Q969H6 163 aaKnown RBP10.3□□□□□ -0.76
USB1-212ENST00000566082 SP140LQ9H930 580 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 VAPAQ9P0L0 249 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 ZNF624Q9P2J8 865 aaPredicted RBP10.3□□□□□ -0.76
USB1-212ENST00000566082 MALT1Q9UDY8 824 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 SPATA2Q9UM82 520 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 ZNF232Q9UNY5 417 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 GPR45Q9Y5Y3 372 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 NDUFB5O43674 189 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 PRPS2P11908 318 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 AKR1A1P14550 325 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 ITIH1P19827 911 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 FPR1P21462 350 aa10.3□□□□□ -0.76
USB1-212ENST00000566082 SERPINA4P29622 427 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms