RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 BANPQ8N9N5 519 aa16.97■□□□□ 0.31
PTPN21-208ENST00000556564 AVL9Q8NBF6 648 aa16.97■□□□□ 0.31
PTPN21-208ENST00000556564 BPIFB6Q8NFQ5 453 aa16.97■□□□□ 0.31
PTPN21-208ENST00000556564 MAGEL2Q9UJ55 1249 aa16.97■□□□□ 0.31
PTPN21-208ENST00000556564 KERAO60938 352 aa16.97■□□□□ 0.31
PTPN21-208ENST00000556564 SAGP10523 405 aaPredicted RBP16.97■□□□□ 0.31
PTPN21-208ENST00000556564 PXNP49023 591 aaPredicted RBP16.97■□□□□ 0.31
PTPN21-208ENST00000556564 RPS14P62263 151 aaKnown RBP16.97■□□□□ 0.31
PTPN21-208ENST00000556564 MYBPC1Q00872 1141 aa16.97■□□□□ 0.31
PTPN21-208ENST00000556564 TDRPQ86YL5 185 aa16.97■□□□□ 0.31
PTPN21-208ENST00000556564 KIAA2013Q8IYS2 634 aa16.97■□□□□ 0.31
PTPN21-208ENST00000556564 SMPDL3AQ92484 453 aa16.97■□□□□ 0.31
PTPN21-208ENST00000556564 C7orf26Q96N11 449 aa16.97■□□□□ 0.31
PTPN21-208ENST00000556564 DDX28Q9NUL7 540 aaKnown RBP16.97■□□□□ 0.31
PTPN21-208ENST00000556564 LATS1O95835 1130 aa16.97■□□□□ 0.31
PTPN21-208ENST00000556564 KLK3P07288 261 aaPredicted RBP16.97■□□□□ 0.31
PTPN21-208ENST00000556564 ZNF33AQ06730 810 aa16.97■□□□□ 0.31
PTPN21-208ENST00000556564 SLC8B1Q6J4K2 584 aa16.97■□□□□ 0.31
PTPN21-208ENST00000556564 NUDT13Q86X67 352 aa16.97■□□□□ 0.31
PTPN21-208ENST00000556564 ZNF576Q9H609 170 aa16.97■□□□□ 0.31
PTPN21-208ENST00000556564 SAMD4AQ9UPU9 718 aaKnown RBP16.97■□□□□ 0.31
PTPN21-208ENST00000556564 LIN7AO14910 233 aaPredicted RBP16.96■□□□□ 0.31
PTPN21-208ENST00000556564 WFS1O76024 890 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 CLPTM1O96005 669 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 NEK2P51955 445 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 HMGCS1Q01581 520 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 LRRC70Q7Z2Q7 622 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 HM13Q8TCT9 377 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 DCAKDQ8WVC6 231 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 MTERF3Q96E29 417 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 PHIPQ8WWQ0 1821 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 SDC3O75056 442 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 CCKBRP32239 447 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 DYNC1I2Q13409 638 aaKnown RBP16.96■□□□□ 0.31
PTPN21-208ENST00000556564 STRA6Q9BX79 667 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 NMUR2Q9GZQ4 415 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 ZSCAN32Q9NX65 697 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 MAGEB17A8MXT2 336 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 TPST2O60704 377 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 B4GALT2O60909 372 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 STC1P52823 247 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 RGS8P57771 180 aaPredicted RBP16.96■□□□□ 0.31
PTPN21-208ENST00000556564 SEMA3AQ14563 771 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 INAQ16352 499 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 GLYATQ6IB77 296 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 B3GNT9Q6UX72 402 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 JAZF1Q86VZ6 243 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 ULK2Q8IYT8 1036 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 CLSTN3Q9BQT9 956 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 TDRD1Q9BXT4 1180 aaKnown RBP16.96■□□□□ 0.31
PTPN21-208ENST00000556564 ADAP2Q9NPF8 381 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 TRPS1Q9UHF7 1281 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 PRPS2P11908 318 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 IMPDH1P20839 514 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 FBXW8Q8N3Y1 598 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 SUN3Q8TAQ9 357 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 FAM110BQ8TC76 370 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 FGF13Q92913 245 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 MRGPRX2Q96LB1 330 aa16.96■□□□□ 0.31
PTPN21-208ENST00000556564 EPS8Q12929 822 aa16.96■□□□□ 0.3
PTPN21-208ENST00000556564 GOLGA7Q7Z5G4 137 aa16.96■□□□□ 0.3
PTPN21-208ENST00000556564 UMODL1-AS1Q8N2C9 162 aa16.96■□□□□ 0.3
PTPN21-208ENST00000556564 NXPE1Q8N323 547 aa16.96■□□□□ 0.3
PTPN21-208ENST00000556564 EPS8L2Q9H6S3 715 aa16.96■□□□□ 0.3
PTPN21-208ENST00000556564 HRASLS2Q9NWW9 162 aa16.96■□□□□ 0.3
PTPN21-208ENST00000556564 SH3GLB1Q9Y371 365 aa16.96■□□□□ 0.3
PTPN21-208ENST00000556564 OR1A2Q9Y585 309 aa16.96■□□□□ 0.3
PTPN21-208ENST00000556564 A0A1B0GUL6 1792 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 FAM159BA6NKW6 160 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 ARHGEF9O43307 516 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 DEFA1P59665 94 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 DEFA3P59666 94 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 SLC10A2Q12908 348 aaPredicted RBP16.95■□□□□ 0.3
PTPN21-208ENST00000556564 FAM174BQ3ZCQ3 159 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 ZC3HC1Q86WB0 502 aaKnown RBP16.95■□□□□ 0.3
PTPN21-208ENST00000556564 MAGEE1Q9HCI5 957 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 PDP2Q9P2J9 529 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 LDB2O43679 373 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 CASRP41180 1078 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 OR9A1PQ8NGU1 263 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 CHRM1P11229 460 aaPredicted RBP16.95■□□□□ 0.3
PTPN21-208ENST00000556564 C6P13671 934 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 YAP1P46937 504 aaKnown RBP16.95■□□□□ 0.3
PTPN21-208ENST00000556564 ERVFC1P60507 584 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 BNC1Q01954 994 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 PLGLB1Q02325 96 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 PCBP2Q15366 365 aaKnown RBP eCLIP16.95■□□□□ 0.3
PTPN21-208ENST00000556564 RINLQ6ZS11 566 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 TRAM1L1Q8N609 369 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 RORBQ92753 470 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 STRADBQ9C0K7 418 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 MRM3Q9HC36 420 aaKnown RBP16.95■□□□□ 0.3
PTPN21-208ENST00000556564 SERTAD3Q9UJW9 196 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 G3V2T6 193 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 SEMA4FO95754 770 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 KHKP50053 298 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 DPYSQ14117 519 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 ZBTB6Q15916 424 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 TMC8Q8IU68 726 aa16.95■□□□□ 0.3
PTPN21-208ENST00000556564 SMYD1Q8NB12 490 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms