RNA–Protein interactions for RNA: ENST00000555810.5

TUBB3-210, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-210ENST00000555810 TMEM220Q6QAJ8 160 aa13.76□□□□□ -0.21
TUBB3-210ENST00000555810 SHISA6Q6ZSJ9 500 aa13.76□□□□□ -0.21
TUBB3-210ENST00000555810 BEND7Q8N7W2 519 aaPredicted RBP13.76□□□□□ -0.21
TUBB3-210ENST00000555810 SPATA22Q8NHS9 363 aa13.76□□□□□ -0.21
TUBB3-210ENST00000555810 PROKR1Q8TCW9 393 aa13.76□□□□□ -0.21
TUBB3-210ENST00000555810 DTX3LQ8TDB6 740 aa13.76□□□□□ -0.21
TUBB3-210ENST00000555810 ADAMTS18Q8TE60 1221 aa13.76□□□□□ -0.21
TUBB3-210ENST00000555810 NRTNQ99748 197 aa13.76□□□□□ -0.21
TUBB3-210ENST00000555810 TRIM56Q9BRZ2 755 aaKnown RBP13.76□□□□□ -0.21
TUBB3-210ENST00000555810 PITPNM3Q9BZ71 974 aa13.76□□□□□ -0.21
TUBB3-210ENST00000555810 TRABDQ9H4I3 376 aa13.76□□□□□ -0.21
TUBB3-210ENST00000555810 TXLNGQ9NUQ3 528 aa13.76□□□□□ -0.21
TUBB3-210ENST00000555810 IRAK4Q9NWZ3 460 aa13.76□□□□□ -0.21
TUBB3-210ENST00000555810 PCDHA13Q9Y5I0 950 aa13.76□□□□□ -0.21
TUBB3-210ENST00000555810 RTTNQ86VV8 2226 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 hCG_1818297A0A087WSY0 165 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 KLHL33A6NCF5 533 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 SLC19A2O60779 497 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 PMPCBO75439 489 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 WISP2O76076 250 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 CTSBP07858 339 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 PECAM1P16284 738 aaPredicted RBP13.75□□□□□ -0.21
TUBB3-210ENST00000555810 IST1P53990 364 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 WASHC5Q12768 1159 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.75□□□□□ -0.21
TUBB3-210ENST00000555810 NKAIN1Q4KMZ8 207 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 FAM182AQ5T1J6 154 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 ZDHHC20Q5W0Z9 365 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 METRNLQ641Q3 311 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 Q71RC1 249 aaPredicted RBP13.75□□□□□ -0.21
TUBB3-210ENST00000555810 CCDC50Q8IVM0 306 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 ZNF655Q8N720 491 aaPredicted RBP13.75□□□□□ -0.21
TUBB3-210ENST00000555810 RASGEF1AQ8N9B8 481 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 QKIQ96PU8 341 aaKnown RBP eCLIP13.75□□□□□ -0.21
TUBB3-210ENST00000555810 LMF1Q96S06 567 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 MDFIQ99750 246 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 TMEM121Q9BTD3 319 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 ENKD1Q9H0I2 346 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 SRMSQ9H3Y6 488 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.75□□□□□ -0.21
TUBB3-210ENST00000555810 HACD3Q9P035 362 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 KLHL8Q9P2G9 620 aaPredicted RBP13.75□□□□□ -0.21
TUBB3-210ENST00000555810 SAE1Q9UBE0 346 aaPredicted RBP13.75□□□□□ -0.21
TUBB3-210ENST00000555810 TRHDEQ9UKU6 1024 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 AP1M2Q9Y6Q5 423 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 ABCA4P78363 2273 aa13.75□□□□□ -0.21
TUBB3-210ENST00000555810 LOC285095A0A1B0GVY8 99 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 DYTNA2CJ06 578 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 FAM221AA4D161 298 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 BTN3A3O00478 584 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 HCRTR1O43613 425 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 IPO7O95373 1038 aaKnown RBP13.74□□□□□ -0.21
TUBB3-210ENST00000555810 NFKB1P19838 968 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 ALAS2P22557 587 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 DNAJA1P31689 397 aaKnown RBP13.74□□□□□ -0.21
TUBB3-210ENST00000555810 CD68P34810 354 aaPredicted RBP13.74□□□□□ -0.21
TUBB3-210ENST00000555810 HMGCLP35914 325 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 WNT3AP56704 352 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 COPS2P61201 443 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 INAQ16352 499 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 TUBB8Q3ZCM7 444 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 LDLRAP1Q5SW96 308 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 KDELC1Q6UW63 502 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 KIRREL2Q6UWL6 708 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 BBS12Q6ZW61 710 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 DAAM2Q86T65 1068 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 TMEM200AQ86VY9 491 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 CHDHQ8NE62 594 aaPredicted RBP13.74□□□□□ -0.21
TUBB3-210ENST00000555810 DDHD1Q8NEL9 900 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 LCN9Q8WX39 176 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 PANX2Q96RD6 677 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 FCRL5Q96RD9 977 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 FERMT1Q9BQL6 677 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.74□□□□□ -0.216e-7■□□□□ 11.2
TUBB3-210ENST00000555810 GOLPH3Q9H4A6 298 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 FAM60AQ9NP50 221 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 UBP1Q9NZI7 540 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 ACSL5Q9ULC5 683 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 HS3ST3B1Q9Y662 390 aa13.74□□□□□ -0.21
TUBB3-210ENST00000555810 GTF3C1Q12789 2109 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 TRAV17A0A0B4J275 112 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 APOC4-APOC2K7ER74 178 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 BTN3A1O00481 513 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 RASAL1O95294 804 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 CRYABP02511 175 aaKnown RBP13.73□□□□□ -0.21
TUBB3-210ENST00000555810 APOC2P02655 101 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 POLBP06746 335 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 SLC35G4P0C7Q5 338 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 PYGMP11217 842 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 TNFSF10P50591 281 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 TMPRSS15P98073 1019 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 LTBQ06643 244 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 MPP3Q13368 585 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 DET1Q7L5Y6 550 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 PID1Q7Z2X4 250 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 ZNF567Q8N184 647 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 NAT14Q8WUY8 206 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 MRFAP1L1Q96HT8 127 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 GPAMQ9HCL2 828 aa13.73□□□□□ -0.21
TUBB3-210ENST00000555810 SLC22A11Q9NSA0 550 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms