RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 TPBGLP0DKB5 382 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ST6GAL1P15907 406 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 OGNP20774 298 aaKnown RBP9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 STAT5AP42229 794 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ADARP55265 1226 aaKnown RBP9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 EIF3BP55884 814 aaKnown RBP9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CYP4F2P78329 520 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 MC1RQ01726 317 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 C19orf57Q0VDD7 668 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 THOC5Q13769 683 aaKnown RBP9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 GPR19Q15760 415 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TBR1Q16650 682 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 KYNUQ16719 465 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TYSND1Q2T9J0 566 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 LINC00303Q3SY05 128 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PLEKHS1Q5SXH7 462 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 RNASEH2BQ5TBB1 312 aaKnown RBP9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TTC23LQ6PF05 361 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 UNC5DQ6UXZ4 953 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 OTOAQ7RTW8 1153 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TMEM135Q86UB9 458 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CREG2Q8IUH2 290 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 VRK3Q8IV63 474 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 UNC5BQ8IZJ1 945 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 LKAAEAR1Q8TD35 194 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 EXTL1Q92935 676 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SLCO2A1Q92959 643 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ZNF669Q96BR6 464 aaPredicted RBP9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ZNF501Q96CX3 271 aaPredicted RBP9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 STAMBPL1Q96FJ0 436 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 BIRC8Q96P09 236 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TRAPPC9Q96Q05 1148 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ARHGAP9Q9BRR9 750 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PITPNM3Q9BZ71 974 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 DDX47Q9H0S4 455 aaKnown RBP9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 FANCEQ9HB96 536 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 LATS2Q9NRM7 1088 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 IL17BQ9UHF5 180 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 LNPEPQ9UIQ6 1025 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SERTAD3Q9UJW9 196 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CRYL1Q9Y2S2 319 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CFAP46Q8IYW2 2715 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 FER1L5A0AVI2 2057 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ISM1B1AKI9 464 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 DNALI1O14645 258 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SCRG1O75711 98 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 USP1O94782 785 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TIAF1O95411 115 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PRB1P04280 392 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CHRM5P08912 532 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 MSL3P1P0C860 447 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CHRM3P20309 590 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 DLSTP36957 453 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PAFAH1B1P43034 410 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PTGIRP43119 386 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 MAGEA3P43357 314 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 RAB28P51157 221 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PTK6Q13882 451 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 LY6DQ14210 128 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 KIR2DS3Q14952 304 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 MSS51Q4VC12 460 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CRTC2Q53ET0 693 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CTSL3PQ5NE16 218 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SPESP1Q6UW49 350 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SYDE1Q6ZW31 735 aaPredicted RBP9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CENPUQ71F23 418 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CILP2Q8IUL8 1156 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 EXD3Q8N9H8 876 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CALML6Q8TD86 181 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 LPGAT1Q92604 370 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 RNF31Q96EP0 1072 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 MED8Q96G25 268 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TCTN2Q96GX1 697 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CAPZA3Q96KX2 299 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 FOPNLQ96NB1 174 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 RUNDC3BQ96NL0 473 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CATSPER2Q96P56 530 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 OR2A14Q96R47 310 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 USB1Q9BQ65 265 aaKnown RBP9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CHRNA10Q9GZZ6 450 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 LHX9Q9NQ69 397 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 INTS10Q9NVR2 710 aaKnown RBP9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SPHK1Q9NYA1 384 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 RNF14Q9UBS8 474 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ASIC3Q9UHC3 531 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 KCND3Q9UK17 655 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CROTQ9UKG9 612 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PLAGL1Q9UM63 463 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 MRFAP1Q9Y605 127 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 MAD1L1Q9Y6D9 718 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 FAM169AQ9Y6X4 670 aa9.41□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ZCWPW2A0A1B0GU75 182 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TMEM150CB9EJG8 249 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CCDC188H7C350 402 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 KATNA1O75449 491 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 RECKO95980 971 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 KLK3P07288 261 aaPredicted RBP9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SFTPCP11686 197 aa9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PKMP14618 531 aaKnown RBP9.4□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PVRP15151 417 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms