RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 DSC1Q08554 894 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 Q0VFX4 171 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 MTF1Q14872 753 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 EFNB3Q15768 340 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 CCDC6Q16204 474 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 NTRK2Q16620 822 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 PNLIPRP3Q17RR3 467 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 KRT71Q3SY84 523 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 ACCSLQ4AC99 568 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 RARS2Q5T160 578 aaKnown RBP4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 DAB2IPQ5VWQ8 1189 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 PRPF39Q86UA1 669 aaKnown RBP4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 FAM228AQ86W67 206 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 EPHX4Q8IUS5 362 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 ARHGAP24Q8N264 748 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 FBXL16Q8N461 479 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 PRR26Q8N8Z3 221 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 SMYD1Q8NB12 490 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 SPATA4Q8NEY3 305 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 OR8K5Q8NH50 307 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 OR14A16Q8NHC5 309 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 ERMNQ8TAM6 284 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 AGAP11Q8TF27 550 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 OIT3Q8WWZ8 545 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 DNAJC9Q8WXX5 260 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 TAF4BQ92750 862 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 EGLN2Q96KS0 407 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 GSDMAQ96QA5 445 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 CENPOQ9BU64 300 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 MAGIXQ9H6Y5 334 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 C17orf75Q9HAS0 396 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 RNPEPL1Q9HAU8 725 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 TMBIM4Q9HC24 238 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 PDE7BQ9NP56 450 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 MMP25Q9NPA2 562 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 TRPV5Q9NQA5 729 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 GIMAP4Q9NUV9 329 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 EXOC1Q9NV70 894 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 MTMR10Q9NXD2 777 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 MIS18AQ9NYP9 233 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 AIPL1Q9NZN9 384 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 MRPL15Q9P015 296 aaKnown RBP4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 NDUFA13Q9P0J0 144 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 THEGQ9P2T0 379 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 COPG2Q9UBF2 871 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 SLC12A6Q9UHW9 1150 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 RASAL2Q9UJF2 1139 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 EXO1Q9UQ84 846 aaKnown RBP4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 SH3GLB1Q9Y371 365 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 PDS5AQ29RF7 1337 aaKnown RBP4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 A0A1B0GUL6 1792 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 SIPA1L3O60292 1781 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 USP6P35125 1406 aa4.37□□□□□ -1.71
HMGB1P16-201ENST00000447155 MYH3P11055 1940 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 DLEC1Q9Y238 1755 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 A0A087WWV3 80 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 KANSL1LA0AUZ9 987 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 OR2A25A4D2G3 310 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 LRRC72A6NJI9 287 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZNF233A6NK53 670 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 CCDC169A6NNP5 214 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 A8MV72 311 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 CCDC188H7C350 402 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 NVLO15381 856 aaKnown RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 PAPSS1O43252 624 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZNF189O75820 626 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 SERPINI2O75830 405 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 CRYABP02511 175 aaKnown RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 FAM200BP0CF97 657 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 TRIM21P19474 475 aaKnown RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 SP100P23497 879 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 C21orf33P30042 268 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 KRT20P35900 424 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 VHLP40337 213 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 GPR143P51810 404 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 PSMC6P62333 389 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 CSNK2A1P68400 391 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 PDE1BQ01064 536 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 SULT2A1Q06520 285 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 SNX1Q13596 522 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 PCLAFQ15004 111 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 INAQ16352 499 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 PARP6Q2NL67 630 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 TDRD12Q587J7 1177 aaKnown RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 HSP90AA5PQ58FG0 334 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZNF805Q5CZA5 627 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 EFHC1Q5JVL4 640 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 FRG2Q64ET8 278 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 C8orf82Q6P1X6 216 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 KCTD18Q6PI47 426 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 KRT74Q7RTS7 529 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 PHLDB2Q86SQ0 1253 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 ADGRA1Q86SQ6 560 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 ZNF554Q86TJ5 538 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 SPATA24Q86W54 205 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 DZIP1Q86YF9 867 aaKnown RBP4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 MCEMP1Q8IX19 187 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 SCML4Q8N228 414 aa4.36□□□□□ -1.71
HMGB1P16-201ENST00000447155 TMTC2Q8N394 836 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms