RNA–Protein interactions for RNA: ENST00000576921.1

HCFC1R1-209, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best)

Gene HCFC1R1, Length 1,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-209ENST00000576921 ZNF669Q96BR6 464 aaPredicted RBP20.48■□□□□ 0.87
HCFC1R1-209ENST00000576921 ZNF501Q96CX3 271 aaPredicted RBP20.48■□□□□ 0.87
HCFC1R1-209ENST00000576921 PANX3Q96QZ0 392 aa20.48■□□□□ 0.87
HCFC1R1-209ENST00000576921 P2RY12Q9H244 342 aa20.48■□□□□ 0.87
HCFC1R1-209ENST00000576921 XAB2Q9HCS7 855 aaKnown RBP20.48■□□□□ 0.87
HCFC1R1-209ENST00000576921 IL1RAPL1Q9NZN1 696 aa20.48■□□□□ 0.87
HCFC1R1-209ENST00000576921 CIDEBQ9UHD4 219 aa20.48■□□□□ 0.87
HCFC1R1-209ENST00000576921 CDYLQ9Y232 598 aa20.48■□□□□ 0.87
HCFC1R1-209ENST00000576921 TMEM150CB9EJG8 249 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 CES2O00748 559 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 KDM1AO60341 852 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 CHRM5P08912 532 aaPredicted RBP20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 UGT2B7P16662 529 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 PAMP19021 973 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 TCN2P20062 427 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 F8A1P23610 371 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 AOAHP28039 575 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 FNTAP49354 379 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 ABRQ12979 859 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 PPP1R7Q15435 360 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 KIAA0930Q6ICG6 404 aaPredicted RBP20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 BORAQ6PGQ7 559 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 SPESP1Q6UW49 350 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 LRRC6Q86X45 466 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 CT55Q8WUE5 264 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 SKA2Q8WVK7 121 aaPredicted RBP20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 SERPINB12Q96P63 405 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 FCRL4Q96PJ5 515 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 TRAPPC9Q96Q05 1148 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 PITPNM3Q9BZ71 974 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 LHX9Q9NQ69 397 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 KCND1Q9NSA2 647 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 TSR3Q9UJK0 312 aaKnown RBP20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 PADI1Q9ULC6 663 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 NEU2Q9Y3R4 380 aa20.47■□□□□ 0.87
HCFC1R1-209ENST00000576921 PFDN6O15212 129 aa20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 CPNE3O75131 537 aaKnown RBP20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 GPC4O75487 556 aa20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 RPN2P04844 631 aa20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 TPBGLP0DKB5 382 aa20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 RPS3P23396 243 aaKnown RBP eCLIP20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 FMO4P31512 558 aa20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 MC1RQ01726 317 aa20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 DHX34Q14147 1143 aaKnown RBP20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 CTSL3PQ5NE16 218 aa20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 RNF187Q5TA31 235 aaPredicted RBP20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 ATP1A1-AS1Q5TC04 95 aa20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 OTOAQ7RTW8 1153 aa20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 MCUQ8NE86 351 aa20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 OR8K5Q8NH50 307 aa20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 FAM136AQ96C01 138 aa20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 CATSPER2Q96P56 530 aa20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 SPHK1Q9NYA1 384 aa20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 ZNF462Q96JM2 2506 aa20.46■□□□□ 0.87
HCFC1R1-209ENST00000576921 SDR42E2A6NKP2 422 aa20.45■□□□□ 0.86
HCFC1R1-209ENST00000576921 ISM1B1AKI9 464 aa20.45■□□□□ 0.86
HCFC1R1-209ENST00000576921 MLNP12872 115 aa20.45■□□□□ 0.86
HCFC1R1-209ENST00000576921 TCP1P17987 556 aaKnown RBP20.45■□□□□ 0.86
HCFC1R1-209ENST00000576921 OAS2P29728 719 aaKnown RBP20.45■□□□□ 0.86
HCFC1R1-209ENST00000576921 DNASE1L3Q13609 305 aa20.45■□□□□ 0.86
HCFC1R1-209ENST00000576921 TYSND1Q2T9J0 566 aa20.45■□□□□ 0.86
HCFC1R1-209ENST00000576921 PRAMEF17Q5VTA0 474 aa20.45■□□□□ 0.86
HCFC1R1-209ENST00000576921 DCUN1D3Q8IWE4 304 aa20.45■□□□□ 0.86
HCFC1R1-209ENST00000576921 C19orf47Q8N9M1 422 aaKnown RBP20.45■□□□□ 0.86
HCFC1R1-209ENST00000576921 LPGAT1Q92604 370 aa20.45■□□□□ 0.86
HCFC1R1-209ENST00000576921 CAPZA3Q96KX2 299 aa20.45■□□□□ 0.86
HCFC1R1-209ENST00000576921 DDX47Q9H0S4 455 aaKnown RBP20.45■□□□□ 0.86
HCFC1R1-209ENST00000576921 OR6C2Q9NZP2 312 aa20.45■□□□□ 0.86
HCFC1R1-209ENST00000576921 ASIC3Q9UHC3 531 aa20.45■□□□□ 0.86
HCFC1R1-209ENST00000576921 CRYL1Q9Y2S2 319 aa20.45■□□□□ 0.86
HCFC1R1-209ENST00000576921 MAD1L1Q9Y6D9 718 aa20.45■□□□□ 0.86
HCFC1R1-209ENST00000576921 FAM237BA0A1B0GVD1 139 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 KPNA5O15131 536 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 NIPSNAP2O75323 286 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 SLCO2B1O94956 709 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 OGNP20774 298 aaKnown RBP20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 CYP2A7P20853 494 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 PKLRP30613 574 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 GNG11P61952 73 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 DEFB109BQ30KR1 87 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 ANKRD20A4Q4UJ75 823 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 ZNF470Q6ECI4 717 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 FAM199XQ6PEV8 388 aaPredicted RBP20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 UNC5DQ6UXZ4 953 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 TAX1BP1Q86VP1 789 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 PPIL6Q8IXY8 311 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 C2orf73Q8N5S3 287 aaPredicted RBP20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 OR1L3Q8NH93 324 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 N4BP2L2Q92802 583 aaPredicted RBP20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 PDLIM2Q96JY6 352 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 OR2A14Q96R47 310 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 SYTL2Q9HCH5 934 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 LATS2Q9NRM7 1088 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 KCND3Q9UK17 655 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 RUVBL2Q9Y230 463 aaKnown RBP20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 PCDHB3Q9Y5E6 796 aa20.44■□□□□ 0.86
HCFC1R1-209ENST00000576921 A0A0J9YY10 115 aa20.43■□□□□ 0.86
HCFC1R1-209ENST00000576921 F7P08709 466 aaPredicted RBP20.43■□□□□ 0.86
HCFC1R1-209ENST00000576921 CCR10P46092 362 aa20.43■□□□□ 0.86
HCFC1R1-209ENST00000576921 RAB28P51157 221 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms