RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 SPCS2Q15005 226 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 CYBRD1Q53TN4 286 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 GALNT10Q86SR1 603 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 LUZP2Q86TE4 346 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 GOLM1Q8NBJ4 401 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 TSPEARQ8WU66 669 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 PIH1D2Q8WWB5 315 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 ZNF599Q96NL3 588 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 CNPPD1Q9BV87 410 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 MOV10Q9HCE1 1003 aaKnown RBP10.33□□□□□ -0.76
USB1-212ENST00000566082 ADAMTS5Q9UNA0 930 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.33□□□□□ -0.76
USB1-212ENST00000566082 NFKBIEO00221 500 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 KPNA5O15131 536 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 ZW10O43264 779 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 PAPSS2O95340 614 aaPredicted RBP10.33□□□□□ -0.76
USB1-212ENST00000566082 OPN1SWP03999 348 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 ALDH2P05091 517 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 DCKP27707 260 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 HUNKP57058 714 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 EMX2Q04743 252 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 CNTN1Q12860 1018 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 DUSP4Q13115 394 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 IL18R1Q13478 541 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 FAM219BQ5XKK7 198 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 OR4F3Q6IEY1 312 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 PLET1Q6UQ28 207 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 TMPRSS11AQ6ZMR5 421 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 GOLGA7Q7Z5G4 137 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 CYP4Z1Q86W10 505 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 SERPINA9Q86WD7 417 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 SLCO4A1Q96BD0 722 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 NACC2Q96BF6 587 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 PYURFQ96I23 114 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 ZNF641Q96N77 438 aaPredicted RBP10.33□□□□□ -0.76
USB1-212ENST00000566082 TSPAN18Q96SJ8 248 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 DUS2Q9NX74 493 aaKnown RBP10.33□□□□□ -0.76
USB1-212ENST00000566082 ENOPH1Q9UHY7 261 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 CPQQ9Y646 472 aa10.33□□□□□ -0.76
USB1-212ENST00000566082 NHSQ6T4R5 1651 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 RBM47A0AV96 593 aaKnown RBP10.32□□□□□ -0.76
USB1-212ENST00000566082 OR10H3O60404 316 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 ERN1O75460 977 aaKnown RBP10.32□□□□□ -0.76
USB1-212ENST00000566082 GLUD1P00367 558 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 PTGER3P43115 390 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 CYP4F8P98187 520 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 GALNT1Q10472 559 aaPredicted RBP10.32□□□□□ -0.76
USB1-212ENST00000566082 KCTD11Q693B1 232 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 USP43Q70EL4 1123 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 ZZZ3Q8IYH5 903 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 KRTCAP2Q8N6L1 136 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 NDNFQ8TB73 568 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 TMEM159Q96B96 161 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 L3HYPDHQ96EM0 354 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 TCF25Q9BQ70 676 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 ITPAQ9BY32 194 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 ZFYVE1Q9HBF4 777 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 SNTG1Q9NSN8 517 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 DNMT3LQ9UJW3 386 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 NRAPQ86VF7 1730 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 NT5C1B-RDH14C9J2C7 533 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 PDE9AO76083 593 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 POLR2IP36954 125 aaKnown RBP10.32□□□□□ -0.76
USB1-212ENST00000566082 TP53BP2Q13625 1128 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 TYSND1Q2T9J0 566 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 ZNF544Q6NX49 715 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 ITPKCQ96DU7 683 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 C1GALT1C1Q96EU7 318 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 COPS8Q99627 209 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 PAAF1Q9BRP4 392 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 RNF38Q9H0F5 515 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 TRPV5Q9NQA5 729 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 SPATA7Q9P0W8 599 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 PADI3Q9ULW8 664 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 SSR3Q9UNL2 185 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 ARIH1Q9Y4X5 557 aaPredicted RBP10.32□□□□□ -0.76
USB1-212ENST00000566082 PCDHB1Q9Y5F3 818 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 USP3Q9Y6I4 520 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 A0A0G2JLL6 359 aaPredicted RBP10.32□□□□□ -0.76
USB1-212ENST00000566082 MAGEB17A8MXT2 336 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 CLIC1O00299 241 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 UBFD1O14562 309 aaKnown RBP10.32□□□□□ -0.76
USB1-212ENST00000566082 AP2A2O94973 939 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 MATN4O95460 622 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 EPORP19235 508 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 PSMA1P25786 263 aaKnown RBP10.32□□□□□ -0.76
USB1-212ENST00000566082 DNAJA1P31689 397 aaKnown RBP10.32□□□□□ -0.76
USB1-212ENST00000566082 TALDO1P37837 337 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 MAGEA12P43365 314 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 SLC15A1P46059 708 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 KCNC1P48547 511 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 RAB14P61106 215 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 ABRQ12979 859 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 RAPSNQ13702 412 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 GTDC1Q4AE62 458 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 CPTPQ5TA50 214 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 PLEKHG7Q6ZR37 379 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 PRRT2Q7Z6L0 340 aaPredicted RBP10.32□□□□□ -0.76
USB1-212ENST00000566082 RHEBL1Q8TAI7 183 aa10.32□□□□□ -0.76
USB1-212ENST00000566082 RNFT2Q96EX2 444 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms