RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 DPH2Q9BQC3 489 aaPredicted RBP11.1□□□□□ -0.63
RAB5C-203ENST00000546881 SPRTNQ9H040 489 aaPredicted RBP11.1□□□□□ -0.63
RAB5C-203ENST00000546881 LZTFL1Q9NQ48 299 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 CUEDC1Q9NWM3 386 aaPredicted RBP11.1□□□□□ -0.63
RAB5C-203ENST00000546881 NDOR1Q9UHB4 597 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 ICKQ9UPZ9 632 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 TDRKHQ9Y2W6 561 aaKnown RBP11.1□□□□□ -0.63
RAB5C-203ENST00000546881 PTRH2Q9Y3E5 179 aaKnown RBP11.1□□□□□ -0.63
RAB5C-203ENST00000546881 MED13Q9UHV7 2174 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 ICE1Q9Y2F5 2266 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 A0A0U1RQJ8 604 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 CCDC78A2IDD5 438 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 GRID2IPA4D2P6 1211 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 AGAP14A8MT82 685 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 FTCDO95954 541 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 MSL3P1P0C860 447 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 UGT2B7P16662 529 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 TPH1P17752 444 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 ACRV1P26436 265 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 VARSP26640 1264 aaKnown RBP11.09□□□□□ -0.63
RAB5C-203ENST00000546881 COL8A1P27658 744 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 CD151P48509 253 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 BOP1Q14137 746 aaKnown RBP11.09□□□□□ -0.63
RAB5C-203ENST00000546881 PLEKHN1Q494U1 663 aaPredicted RBP11.09□□□□□ -0.63
RAB5C-203ENST00000546881 SYTL3Q4VX76 610 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 VWA5B1Q5TIE3 1220 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 LYPLAL1Q5VWZ2 237 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 UBL4BQ8N7F7 174 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 OR5AR1Q8NGP9 310 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 ELMO1Q92556 727 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 SNRNP40Q96DI7 357 aaKnown RBP11.09□□□□□ -0.63
RAB5C-203ENST00000546881 TCTN2Q96GX1 697 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 FER1L6-AS2Q96M78 137 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 SPATA13Q96N96 652 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 SMAD5Q99717 465 aaKnown RBP11.09□□□□□ -0.63
RAB5C-203ENST00000546881 C17orf62Q9BQA9 187 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 DHRS4Q9BTZ2 278 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 OSBPL8Q9BZF1 889 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 ILKAPQ9H0C8 392 aaPredicted RBP11.09□□□□□ -0.63
RAB5C-203ENST00000546881 FAM60AQ9NP50 221 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 TXLNGQ9NUQ3 528 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 ASF1BQ9NVP2 202 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 PIH1D1Q9NWS0 290 aaKnown RBP11.09□□□□□ -0.63
RAB5C-203ENST00000546881 SMARCAL1Q9NZC9 954 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 IFT80Q9P2H3 777 aaPredicted RBP11.09□□□□□ -0.63
RAB5C-203ENST00000546881 DHCR7Q9UBM7 475 aaKnown RBP11.09□□□□□ -0.63
RAB5C-203ENST00000546881 PLAGL1Q9UM63 463 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 ASF1AQ9Y294 204 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 SHANK1Q9Y566 2161 aa11.09□□□□□ -0.63
RAB5C-203ENST00000546881 PCSK5Q92824 1860 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 SPTBN1Q01082 2364 aaKnown RBP11.08□□□□□ -0.64
RAB5C-203ENST00000546881 MASP2O00187 686 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 KLF7O75840 302 aaPredicted RBP11.08□□□□□ -0.64
RAB5C-203ENST00000546881 DDAH2O95865 285 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 ALPPP05187 535 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 SHMT2P34897 504 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 RWDD2BP57060 319 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 FOXL2P58012 376 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 COPS2P61201 443 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 DCDP81605 110 aaKnown RBP11.08□□□□□ -0.64
RAB5C-203ENST00000546881 RPA4Q13156 261 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 MSLNQ13421 630 aaPredicted RBP11.08□□□□□ -0.64
RAB5C-203ENST00000546881 ELOAQ14241 798 aaKnown RBP11.08□□□□□ -0.64
RAB5C-203ENST00000546881 SSPNQ14714 243 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 POU6F1Q14863 301 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 ZIC1Q15915 447 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 DBN1Q16643 649 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 ZNF385CQ66K41 422 aaPredicted RBP11.08□□□□□ -0.64
RAB5C-203ENST00000546881 ZNF787Q6DD87 383 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 DENND5AQ6IQ26 1287 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 AADACL2Q6P093 401 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 NAPRTQ6XQN6 538 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 UNC5AQ6ZN44 842 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 ARHGEF18Q6ZSZ5 1173 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 GALNT16Q8N428 558 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 TAB3Q8N5C8 712 aaPredicted RBP11.08□□□□□ -0.64
RAB5C-203ENST00000546881 RNF10Q8N5U6 811 aaKnown RBP11.08□□□□□ -0.64
RAB5C-203ENST00000546881 ZNF655Q8N720 491 aaPredicted RBP11.08□□□□□ -0.64
RAB5C-203ENST00000546881 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.08□□□□□ -0.64
RAB5C-203ENST00000546881 IP6K3Q96PC2 410 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 PPP1R2P1Q96PQ5 205 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 SPHK1Q9NYA1 384 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 C5AR2Q9P296 337 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 FEZ2Q9UHY8 353 aaPredicted RBP11.08□□□□□ -0.64
RAB5C-203ENST00000546881 CDYLQ9Y232 598 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 B3GNT3Q9Y2A9 372 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 PPP2R2CQ9Y2T4 447 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 AP1M2Q9Y6Q5 423 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 TEX15Q9BXT5 2789 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 SPTBP11277 2137 aa11.08□□□□□ -0.64
RAB5C-203ENST00000546881 IGLV3-16A0A075B6K0 115 aa11.07□□□□□ -0.64
RAB5C-203ENST00000546881 TRBV5-4A0A0C4DH59 114 aa11.07□□□□□ -0.64
RAB5C-203ENST00000546881 A0A0J9YY10 115 aa11.07□□□□□ -0.64
RAB5C-203ENST00000546881 ISM1B1AKI9 464 aa11.07□□□□□ -0.64
RAB5C-203ENST00000546881 ZSCAN9O15535 394 aaPredicted RBP11.07□□□□□ -0.64
RAB5C-203ENST00000546881 HCRTR1O43613 425 aa11.07□□□□□ -0.64
RAB5C-203ENST00000546881 CTSBP07858 339 aa11.07□□□□□ -0.64
RAB5C-203ENST00000546881 CHRM5P08912 532 aaPredicted RBP11.07□□□□□ -0.64
RAB5C-203ENST00000546881 CTNNA1P35221 906 aaKnown RBP11.07□□□□□ -0.64
RAB5C-203ENST00000546881 GLRBP48167 497 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms