RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 TEX51A0A1B0GUA7 166 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 PIPSLA2A3N6 862 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 C2orf74A8MZ97 194 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 B4E171 279 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 STMND1H3BQB6 276 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 GPC4O75487 556 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 TTC4O95801 387 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 SYF2O95926 243 aaKnown RBP10.72□□□□□ -0.69
DDB1-222ENST00000543627 RPN2P04844 631 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 LIPCP11150 499 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 PVRP15151 417 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 FOLR1P15328 257 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 PRDX3P30048 256 aaKnown RBP10.72□□□□□ -0.69
DDB1-222ENST00000543627 SHMT2P34897 504 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 TSPAN7P41732 249 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 PLTPP55058 493 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 RAB15P59190 212 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 TLE3Q04726 772 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 ACSBG2Q5FVE4 666 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 PLEKHS1Q5SXH7 462 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 TMTC4Q5T4D3 741 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 CCDC81Q6ZN84 652 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 PRSS42Q7Z5A4 293 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 TRIM73Q86UV7 250 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 FAM20CQ8IXL6 584 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 ZBED8Q8IZ13 594 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 SLC22A15Q8IZD6 547 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 FBXO36Q8NEA4 188 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 UBXN4Q92575 508 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 BIRC8Q96P09 236 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 NAT9Q9BTE0 207 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 ULBP3Q9BZM4 244 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 SLC7A5P2Q9GIP4 190 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 TFB2MQ9H5Q4 396 aaKnown RBP10.72□□□□□ -0.69
DDB1-222ENST00000543627 PDE7BQ9NP56 450 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 SAYSD1Q9NPB0 183 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 FBXO8Q9NRD0 319 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 IRAK4Q9NWZ3 460 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.72□□□□□ -0.69
DDB1-222ENST00000543627 EPHA6Q9UF33 1036 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 LNPEPQ9UIQ6 1025 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 CDC23Q9UJX2 597 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 CDYLQ9Y232 598 aa10.72□□□□□ -0.69
DDB1-222ENST00000543627 KRT87PA6NCN2 255 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 TLCD2A6NGC4 264 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 SMAPO00193 183 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 NDC80O14777 642 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 TOX3O15405 576 aaPredicted RBP10.71□□□□□ -0.69
DDB1-222ENST00000543627 RAD1O60671 282 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 STK17BO94768 372 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 SLCO2B1O94956 709 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 CHRM5P08912 532 aaPredicted RBP10.71□□□□□ -0.69
DDB1-222ENST00000543627 ANKRD34CP0C6C1 535 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 NELFEP18615 380 aaKnown RBP10.71□□□□□ -0.69
DDB1-222ENST00000543627 ATP1A2P50993 1020 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 TMPRSS3P57727 454 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 HSD11B2P80365 405 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 TUBB3Q13509 450 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 FASTKD3Q14CZ7 662 aaKnown RBP10.71□□□□□ -0.69
DDB1-222ENST00000543627 GPR19Q15760 415 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 KLHL38Q2WGJ6 581 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 TTLL9Q3SXZ7 439 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 CCSMST1Q4G0I0 132 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 C8orf74Q6P047 294 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 ZNF549Q6P9A3 640 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 TRMT10BQ6PF06 316 aaKnown RBP10.71□□□□□ -0.69
DDB1-222ENST00000543627 PPP1R3BQ86XI6 285 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 ADGRF3Q8IZF5 1079 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 CACNA2D3Q8IZS8 1091 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 RAB42Q8N4Z0 105 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 BMPERQ8N8U9 685 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 GPATCH11Q8N954 259 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 PYROXD1Q8WU10 500 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 KLHL6Q8WZ60 621 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 CERS2Q96G23 380 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 CCNL2Q96S94 520 aaPredicted RBP10.71□□□□□ -0.69
DDB1-222ENST00000543627 GPR21Q99679 349 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 SLC30A3Q99726 388 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 DDA1Q9BW61 102 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 RAB33BQ9H082 229 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 RAB17Q9H0T7 212 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 LATS2Q9NRM7 1088 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 SPHK1Q9NYA1 384 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 RARRES3Q9UL19 164 aa10.71□□□□□ -0.69
DDB1-222ENST00000543627 ZZEF1O43149 2961 aa10.7□□□□□ -0.7
DDB1-222ENST00000543627 USP24Q9UPU5 2620 aa10.7□□□□□ -0.7
DDB1-222ENST00000543627 MATN2O00339 956 aa10.7□□□□□ -0.7
DDB1-222ENST00000543627 VPS26AO75436 327 aa10.7□□□□□ -0.7
DDB1-222ENST00000543627 SPAG6O75602 509 aa10.7□□□□□ -0.7
DDB1-222ENST00000543627 KIAA0754O94854 1291 aa10.7□□□□□ -0.7
DDB1-222ENST00000543627 ZBTB11O95625 1053 aaPredicted RBP10.7□□□□□ -0.7
DDB1-222ENST00000543627 NTRK1P04629 796 aa10.7□□□□□ -0.7
DDB1-222ENST00000543627 TPBGLP0DKB5 382 aa10.7□□□□□ -0.7
DDB1-222ENST00000543627 ST6GAL1P15907 406 aa10.7□□□□□ -0.7
DDB1-222ENST00000543627 UGT2B7P16662 529 aa10.7□□□□□ -0.7
DDB1-222ENST00000543627 ZNF28P17035 718 aa10.7□□□□□ -0.7
DDB1-222ENST00000543627 MCM3P25205 808 aa10.7□□□□□ -0.7
DDB1-222ENST00000543627 MAP4P27816 1152 aaKnown RBP10.7□□□□□ -0.7
DDB1-222ENST00000543627 ACY1Q03154 408 aa10.7□□□□□ -0.7
DDB1-222ENST00000543627 TRADDQ15628 312 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms