RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 ITGB2P05107 769 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 APOA4P06727 396 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 EBLN1P0CF75 366 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 LIFP15018 202 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ZNF28P17035 718 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PAMP19021 973 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 WT1P19544 449 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CDH3P22223 829 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 RPS3P23396 243 aaKnown RBP eCLIP9.44□□□□□ -0.93e-7■■■□□ 18.4
TNFRSF1A-214ENST00000543048 AOAHP28039 575 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CSE1LP55060 971 aaKnown RBP9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 HSPA14Q0VDF9 509 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ABRQ12979 859 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 KCNAB1Q14722 419 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PPP1R7Q15435 360 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 DNAJC21Q5F1R6 531 aaKnown RBP9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PTRHD1Q6GMV3 140 aaKnown RBP9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CASC4Q6P4E1 433 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PCSK4Q6UW60 755 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SLC22A15Q8IZD6 547 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ADGRF3Q8IZF5 1079 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 OTUD6BQ8N6M0 293 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 OR5AR1Q8NGP9 310 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 OR8K5Q8NH50 307 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 OR5K2Q8NHB8 316 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 KIF18AQ8NI77 898 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 KIAA1143Q96AT1 154 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PANX3Q96QZ0 392 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 HGH1Q9BTY7 390 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SLC12A9Q9BXP2 914 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ULBP3Q9BZM4 244 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 P2RY12Q9H244 342 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 XKR8Q9H6D3 395 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 GPN2Q9H9Y4 310 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 FGF21Q9NSA1 209 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SAMD15Q9P1V8 674 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 GNPTGQ9UJJ9 305 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 POMT2Q9UKY4 750 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PADI1Q9ULC6 663 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TDRKHQ9Y2W6 561 aaKnown RBP9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 MDC1Q14676 2089 aaKnown RBP9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 FASNP49327 2511 aaKnown RBP9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CTAGE9A4FU28 777 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ZNF891A8MT65 544 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 GOLGA8KD6RF30 607 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 GOLGA8TH3BQL2 631 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 GOLGA8MH3BSY2 632 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TMEM63AO94886 807 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SLCO2B1O94956 709 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 RPN2P04844 631 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ARNTP27540 789 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CASQ1P31415 396 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 FMO4P31512 558 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SHMT2P34897 504 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TUBB4BP68371 445 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TUBB3Q13509 450 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TUBB2AQ13885 445 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 DHX34Q14147 1143 aaKnown RBP9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TMED2Q15363 201 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ANKRD20A4Q4UJ75 823 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 RNF187Q5TA31 235 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PAPD7Q5XG87 772 aaKnown RBP9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 KIAA0930Q6ICG6 404 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PWWP2BQ6NUJ5 590 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 NEPROQ6NW34 567 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 FBXO38Q6PIJ6 1188 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 UNC5AQ6ZN44 842 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PCGF5Q86SE9 256 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 HOOK3Q86VS8 718 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PPIL6Q8IXY8 311 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 KRT222Q8N1A0 295 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 NAT8LQ8N9F0 302 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 GALNT6Q8NCL4 622 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CFAP61Q8NHU2 1237 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 GSDMBQ8TAX9 411 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ZNF592Q92610 1267 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SLC45A3Q96JT2 553 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SIGLEC10Q96LC7 697 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PPM1MQ96MI6 270 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SERPINB12Q96P63 405 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 NAPGQ99747 312 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 NRTNQ99748 197 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TUBB2BQ9BVA1 445 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SYTL2Q9HCH5 934 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SOHLH2Q9NX45 425 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ACTR10Q9NZ32 417 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 OR6C2Q9NZP2 312 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PCYOX1Q9UHG3 505 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ICKQ9UPZ9 632 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CDYLQ9Y232 598 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 BTRCQ9Y297 605 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SAR1BQ9Y6B6 198 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 RPS6KL1Q9Y6S9 549 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 MED13Q9UHV7 2174 aa9.43□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PIPSLA2A3N6 862 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 H3BMM5 538 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 FANCGO15287 622 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 NKX2-8O15522 239 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ESR1P03372 595 aa9.42□□□□□ -0.9
TNFRSF1A-214ENST00000543048 NTRK1P04629 796 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms