RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 RTBDNQ9BSG5 229 aaPredicted RBP0.56□□□□□ -2.32
COPB1-212ENST00000534771 FUZQ9BT04 418 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 STRA6Q9BX79 667 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 FAM49AQ9H0Q0 323 aaPredicted RBP0.56□□□□□ -2.32
COPB1-212ENST00000534771 ADNPQ9H2P0 1102 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 SLA2Q9H6Q3 261 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 RANGRFQ9HD47 186 aaPredicted RBP0.56□□□□□ -2.32
COPB1-212ENST00000534771 FGF21Q9NSA1 209 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 NPAP1Q9NZP6 1156 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 KCND2Q9NZV8 630 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 IL17CQ9P0M4 197 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 ZNF581Q9P0T4 197 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 TSPYL4Q9UJ04 414 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 GTF3C4Q9UKN8 822 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 HSF4Q9ULV5 492 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 PA2G4Q9UQ80 394 aaKnown RBP0.56□□□□□ -2.32
COPB1-212ENST00000534771 R3HDM2Q9Y2K5 976 aaKnown RBP0.56□□□□□ -2.32
COPB1-212ENST00000534771 PPP2R2CQ9Y2T4 447 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 RIPOR2Q9Y4F9 1068 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 WIPI2Q9Y4P8 454 aa0.56□□□□□ -2.32
COPB1-212ENST00000534771 IGLV4-3A0A075B6K6 122 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 hCG_1642624A0A1W2PR95 340 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 A0A1W2PRG0 241 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 PLEKHD1A6NEE1 506 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 RSPH10B2B2RC85 870 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 SLC33A1O00400 549 aaPredicted RBP0.55□□□□□ -2.32
COPB1-212ENST00000534771 MAP2K7O14733 419 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 SMAD9O15198 467 aaKnown RBP0.55□□□□□ -2.32
COPB1-212ENST00000534771 OGTO15294 1046 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 LATO43561 262 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 SNAP91O60641 907 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 GLRA3O75311 464 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 GPC4O75487 556 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 CDK2AP2O75956 126 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 RSPH10BP0C881 870 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 IGHV4-31P0DP07 118 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 HSD3B1P14060 373 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 ZNF17P17021 662 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 ABCD1P33897 745 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 CHKAP35790 457 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 ARL1P40616 181 aaPredicted RBP0.55□□□□□ -2.32
COPB1-212ENST00000534771 HTR3AP46098 478 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 RPL21P46778 160 aaKnown RBP0.55□□□□□ -2.32
COPB1-212ENST00000534771 CTCFP49711 727 aaPredicted RBP0.55□□□□□ -2.32
COPB1-212ENST00000534771 MAZP56270 477 aaKnown RBP0.55□□□□□ -2.32
COPB1-212ENST00000534771 ARL4CP56559 192 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 TAS2R40P59535 323 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 RPS3AP61247 264 aaKnown RBP0.55□□□□□ -2.32
COPB1-212ENST00000534771 GUCY2DQ02846 1103 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 UBE3AQ05086 875 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 PLA2G7Q13093 441 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 SQLEQ14534 574 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 TNIP1Q15025 636 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 EFTUD2Q15029 972 aaKnown RBP eCLIP0.55□□□□□ -2.321e-8■■■■□ 22.8
COPB1-212ENST00000534771 ADIPOQQ15848 244 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 MDH1BQ5I0G3 518 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 FBXO47Q5MNV8 452 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 LRIF1Q5T3J3 769 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 AGAP7PQ5VUJ5 663 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 ZNF530Q6P9A1 599 aaPredicted RBP0.55□□□□□ -2.32
COPB1-212ENST00000534771 IGFL2Q6UWQ7 119 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 TMEM207Q6UWW9 146 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 G2E3Q7L622 706 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 GALNT5Q7Z7M9 940 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 RNF168Q8IYW5 571 aaPredicted RBP0.55□□□□□ -2.32
COPB1-212ENST00000534771 EID3Q8N140 333 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 TMTC2Q8N394 836 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 MYCT1Q8N699 235 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 ENAHQ8N8S7 591 aaPredicted RBP0.55□□□□□ -2.32
COPB1-212ENST00000534771 CSNK1G2-AS1Q8NCQ2 148 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 OR1L3Q8NH93 324 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 SVIPQ8NHG7 77 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 KIR2DL5BQ8NHK3 375 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 C9orf43Q8TAL5 461 aaPredicted RBP0.55□□□□□ -2.32
COPB1-212ENST00000534771 RNF128Q8TEB7 428 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 ZNF721Q8TF20 911 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 PHLDA1Q8WV24 401 aaPredicted RBP0.55□□□□□ -2.32
COPB1-212ENST00000534771 SGCDQ92629 289 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 NSMAFQ92636 917 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 ESAMQ96AP7 390 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 TBC1D20Q96BZ9 403 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 ZBTB10Q96DT7 871 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 NUS1Q96E22 293 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 MTERF3Q96E29 417 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 MMABQ96EY8 250 aaPredicted RBP0.55□□□□□ -2.32
COPB1-212ENST00000534771 ZNF582Q96NG8 517 aaPredicted RBP0.55□□□□□ -2.32
COPB1-212ENST00000534771 NUDCD1Q96RS6 583 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 ABHD6Q9BV23 337 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 NUP85Q9BW27 656 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 SCRT1Q9BWW7 348 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 VN1R1Q9GZP7 353 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 HOXD1Q9GZZ0 328 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 ARRDC1-AS1Q9H2J1 176 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 PLCB1Q9NQ66 1216 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 ITM2CQ9NQX7 267 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 SERINC1Q9NRX5 453 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 OSGIN1Q9UJX0 560 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 SPIN1Q9Y657 262 aaPredicted RBP0.55□□□□□ -2.32
COPB1-212ENST00000534771 POGZQ7Z3K3 1410 aa0.55□□□□□ -2.32
COPB1-212ENST00000534771 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 380.2 ms