RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 LBPP18428 481 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 CBLP22681 906 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 TNFRSF8P28908 595 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 PEX5P50542 639 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 DLG1Q12959 904 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 CDO1Q16878 200 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 SYT14P1Q58G82 188 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 LRRC73Q5JTD7 316 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 CCDC158Q5M9N0 1113 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 TXNRD3NBQ6F5E7 133 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 COMMD2Q86X83 199 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 CREBRFQ8IUR6 639 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 CFAP206Q8IYR0 622 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 CPSF7Q8N684 471 aaKnown RBP6.99□□□□□ -1.29
NUP54-215ENST00000514313 L3MBTL4Q8NA19 623 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 CLEC18CQ8NCF0 446 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 VANGL1Q8TAA9 524 aaPredicted RBP6.99□□□□□ -1.29
NUP54-215ENST00000514313 TEKT1Q969V4 418 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 BSCL2Q96G97 398 aaPredicted RBP6.99□□□□□ -1.29
NUP54-215ENST00000514313 CCDC43Q96MW1 224 aaKnown RBP6.99□□□□□ -1.29
NUP54-215ENST00000514313 CACNG6Q9BXT2 260 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 KRTAP4-2Q9BYR5 136 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 IL25Q9H293 177 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 IL1RAPL2Q9NP60 686 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 B3GAT1Q9P2W7 334 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 CACNG4Q9UBN1 327 aa6.99□□□□□ -1.29
NUP54-215ENST00000514313 A0A1W2PPK0 400 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 LRRD1A4D1F6 860 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 YDJCA8MPS7 323 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 SLC33A1O00400 549 aaPredicted RBP6.98□□□□□ -1.29
NUP54-215ENST00000514313 KINO60870 393 aaKnown RBP6.98□□□□□ -1.29
NUP54-215ENST00000514313 PGLSO95336 258 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 SAGP10523 405 aaPredicted RBP6.98□□□□□ -1.29
NUP54-215ENST00000514313 HAPLN1P10915 354 aaPredicted RBP6.98□□□□□ -1.29
NUP54-215ENST00000514313 PTGER4P35408 488 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 ATP6V1E1P36543 226 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 KCNJ4P48050 445 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 ASIC1P78348 528 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 DLK1P80370 383 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 TNK1Q13470 666 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 MDH1BQ5I0G3 518 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 ZNF549Q6P9A3 640 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 SLC27A1Q6PCB7 646 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 CRYBG2Q8N1P7 616 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 TRIML1Q8N9V2 468 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 RNF128Q8TEB7 428 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 CDCA5Q96FF9 252 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 HMCESQ96FZ2 354 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 RAD9AQ99638 391 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 ACAT2Q9BWD1 397 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 VN1R1Q9GZP7 353 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 TMEM206Q9H813 350 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 SERINC1Q9NRX5 453 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 WNT16Q9UBV4 365 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 LRWD1Q9UFC0 647 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 LEF1Q9UJU2 399 aaPredicted RBP6.98□□□□□ -1.29
NUP54-215ENST00000514313 VDAC3Q9Y277 283 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 ZNF521Q96K83 1311 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 PCDH11YQ9BZA8 1340 aa6.98□□□□□ -1.29
NUP54-215ENST00000514313 COL3A1P02461 1466 aaPredicted RBP6.98□□□□□ -1.29
NUP54-215ENST00000514313 DUXAA6NLW8 204 aa6.97□□□□□ -1.29
NUP54-215ENST00000514313 PPFIA2O75334 1257 aa6.97□□□□□ -1.29
NUP54-215ENST00000514313 CKMT2P17540 419 aa6.97□□□□□ -1.29
NUP54-215ENST00000514313 FBLP22087 321 aaKnown RBP6.97□□□□□ -1.29
NUP54-215ENST00000514313 PSMB4P28070 264 aa6.97□□□□□ -1.29
NUP54-215ENST00000514313 CDC25AP30304 524 aa6.97□□□□□ -1.29
NUP54-215ENST00000514313 ARCN1P48444 511 aaKnown RBP6.97□□□□□ -1.29
NUP54-215ENST00000514313 ACTN3Q08043 901 aaPredicted RBP6.97□□□□□ -1.29
NUP54-215ENST00000514313 LINGO4Q6UY18 593 aa6.97□□□□□ -1.29
NUP54-215ENST00000514313 NHLRC1Q6VVB1 395 aa6.97□□□□□ -1.29
NUP54-215ENST00000514313 OR7G3Q8NG95 312 aa6.97□□□□□ -1.29
NUP54-215ENST00000514313 FIG4Q92562 907 aa6.97□□□□□ -1.29
NUP54-215ENST00000514313 DHX58Q96C10 678 aa6.97□□□□□ -1.29
NUP54-215ENST00000514313 ZNF778Q96MU6 729 aa6.97□□□□□ -1.29
NUP54-215ENST00000514313 SLC2A11Q9BYW1 496 aa6.97□□□□□ -1.29
NUP54-215ENST00000514313 MTUS1Q9ULD2 1270 aa6.97□□□□□ -1.29
NUP54-215ENST00000514313 KNSTRNQ9Y448 316 aa6.97□□□□□ -1.29
NUP54-215ENST00000514313 A0A0G2JNG1 304 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 DDX39AO00148 427 aaKnown RBP6.96□□□□□ -1.3
NUP54-215ENST00000514313 FCGR3BO75015 233 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 MT-ND3P03897 115 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 TFAP2AP05549 437 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 SNRNP70P08621 437 aaKnown RBP6.96□□□□□ -1.3
NUP54-215ENST00000514313 SPP1P10451 314 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 EPCAMP16422 314 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 SOAT1P35610 550 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 AHRP35869 848 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 RGS7P49802 495 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 EGR4Q05215 589 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 LASP1Q14847 261 aaKnown RBP6.96□□□□□ -1.3
NUP54-215ENST00000514313 KIR2DS5Q14953 304 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 C2orf76Q3KRA6 126 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 FAM174BQ3ZCQ3 159 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 LACTB2Q53H82 288 aaPredicted RBP6.96□□□□□ -1.3
NUP54-215ENST00000514313 CCDC92Q53HC0 331 aaPredicted RBP6.96□□□□□ -1.3
NUP54-215ENST00000514313 ELFN2Q5R3F8 820 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 ALKBH5Q6P6C2 394 aaKnown RBP6.96□□□□□ -1.3
NUP54-215ENST00000514313 PACS1Q6VY07 963 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 ZSCAN30Q86W11 494 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 KMT5CQ86Y97 462 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms