RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 KDSRQ06136 332 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 TRAF3Q13114 568 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 CAMK2DQ13557 499 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 LRP10Q7Z4F1 713 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 KIAA0907Q7Z7F0 614 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-209ENST00000511467 FBXO25Q8TCJ0 367 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 FAM111AQ96PZ2 611 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 CRISPLD1Q9H336 500 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 DNAJC18Q9H819 358 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 P2RX2Q9UBL9 471 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 TCAF1Q9Y4C2 921 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 TRAF6Q9Y4K3 522 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 PEX16Q9Y5Y5 336 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 H0YAE9 185 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 RFXANKO14593 260 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 SLC30A4O14863 429 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 PTHP01270 115 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 SOD2P04179 222 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 CCNYL3P0C7X3 344 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 SPATA31C1P0DKV0 1188 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 TNFRSF4P43489 277 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 AQP5P55064 265 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 TMEM62Q0P6H9 643 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 N4BP2L1Q5TBK1 243 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-209ENST00000511467 SAPCD2Q86UD0 394 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 HDDC3Q8N4P3 179 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 CPSF7Q8N684 471 aaKnown RBP4.86□□□□□ -1.63
PTPN13-209ENST00000511467 KCNJ9Q92806 393 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 SLC38A4Q969I6 547 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 CENPNQ96H22 339 aaPredicted RBP4.86□□□□□ -1.63
PTPN13-209ENST00000511467 DPEP2Q9H4A9 486 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 FAM83DQ9H4H8 585 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 INPP5EQ9NRR6 644 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 POFUT2Q9Y2G5 429 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 WASF2Q9Y6W5 498 aa4.86□□□□□ -1.63
PTPN13-209ENST00000511467 C2CD4BA6NLJ0 364 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 BTN3A1O00481 513 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 RGS5O15539 181 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 NRP2O60462 931 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 PQBP1O60828 265 aaKnown RBP4.85□□□□□ -1.63
PTPN13-209ENST00000511467 VIPP01282 170 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 FCER2P06734 321 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 ARRB1P49407 418 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-209ENST00000511467 CDK9P50750 372 aaKnown RBP4.85□□□□□ -1.63
PTPN13-209ENST00000511467 RPS15AP62244 130 aaKnown RBP4.85□□□□□ -1.63
PTPN13-209ENST00000511467 ZNF846Q147U1 533 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 SLC5A9Q2M3M2 681 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 FBXO46Q6PJ61 603 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-209ENST00000511467 GPR156Q8NFN8 814 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 OR2T34Q8NGX1 318 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 OR2T3Q8NH03 318 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 GDPD5Q8WTR4 605 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 PHYHIPQ92561 330 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 RAD9AQ99638 391 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 XPR1Q9UBH6 696 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 SERTAD3Q9UJW9 196 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 NXT1Q9UKK6 140 aaKnown RBP4.85□□□□□ -1.63
PTPN13-209ENST00000511467 MKLN1Q9UL63 735 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 SNX8Q9Y5X2 465 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 FTCDNL1E5RQL4 147 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 E9PAM4 449 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 TSPAN4O14817 238 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 AIM2O14862 343 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 PLD2O14939 933 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 KLRC4O43908 158 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 PAGE1O75459 146 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 SLC25A14O95258 325 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-209ENST00000511467 TSPAN19P0C672 248 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 MPC1LP0DKB6 136 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 HOXB9P17482 250 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-209ENST00000511467 RPS3P23396 243 aaKnown RBP eCLIP4.85□□□□□ -1.63
PTPN13-209ENST00000511467 DNAJA1P31689 397 aaKnown RBP4.85□□□□□ -1.63
PTPN13-209ENST00000511467 MLLT3P42568 568 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-209ENST00000511467 CHN2P52757 468 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 PON3Q15166 354 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 SLC39A12Q504Y0 691 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 LACTB2Q53H82 288 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-209ENST00000511467 ARMCX6Q7L4S7 300 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 TTC7BQ86TV6 843 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 DEFB106AQ8N104 65 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 FBXW8Q8N3Y1 598 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 DENND6BQ8NEG7 585 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 BPIFB6Q8NFQ5 453 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 OR4C6Q8NH72 309 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 GAD1Q99259 594 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 MGME1Q9BQP7 344 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 PI4K2AQ9BTU6 479 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 APOL5Q9BWW9 433 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 NELFAQ9H3P2 528 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 PREBQ9HCU5 417 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 DUS2Q9NX74 493 aaKnown RBP4.85□□□□□ -1.63
PTPN13-209ENST00000511467 RPL36Q9Y3U8 105 aaKnown RBP4.85□□□□□ -1.63
PTPN13-209ENST00000511467 DDTLA6NHG4 134 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-209ENST00000511467 PEX12O00623 359 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 DHX15O43143 795 aaKnown RBP4.85□□□□□ -1.63
PTPN13-209ENST00000511467 SEC14L5O43304 696 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 EPCAMP16422 314 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 TNNI3P19429 210 aa4.85□□□□□ -1.63
PTPN13-209ENST00000511467 VASPP50552 380 aaPredicted RBP4.85□□□□□ -1.63
PTPN13-209ENST00000511467 ADARP55265 1226 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms