RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 TIAL1Q01085 375 aaKnown RBP eCLIP15.53■□□□□ 0.08
SSBP1-214ENST00000498107 ZFP36L1Q07352 338 aaKnown RBP15.53■□□□□ 0.08
SSBP1-214ENST00000498107 SP140Q13342 867 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 UAP1Q16222 522 aaPredicted RBP15.53■□□□□ 0.08
SSBP1-214ENST00000498107 ERCC6LQ2NKX8 1250 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 PHF19Q5T6S3 580 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 LGSNQ5TDP6 509 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 EMBQ6PCB8 327 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 CCDC91Q7Z6B0 441 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 SLITRK4Q8IW52 837 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 GSPT2Q8IYD1 628 aaKnown RBP15.53■□□□□ 0.08
SSBP1-214ENST00000498107 CARFQ8N187 725 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 FBXO15Q8NCQ5 510 aaPredicted RBP15.53■□□□□ 0.08
SSBP1-214ENST00000498107 EEF1AKMT1Q8WVE0 214 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 ASB11Q8WXH4 323 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 ANKRD7Q92527 254 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 RSC1A1Q92681 617 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 LINGO1Q96FE5 620 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 LIN37Q96GY3 246 aaPredicted RBP15.53■□□□□ 0.08
SSBP1-214ENST00000498107 PDLIM5Q96HC4 596 aaKnown RBP15.53■□□□□ 0.08
SSBP1-214ENST00000498107 CD180Q99467 661 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 OGFRQ9NZT2 677 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 PDP2Q9P2J9 529 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 LNPEPQ9UIQ6 1025 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 MTO1Q9Y2Z2 717 aaKnown RBP15.53■□□□□ 0.08
SSBP1-214ENST00000498107 MSRB2Q9Y3D2 182 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 ENTPD2Q9Y5L3 495 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 NFS1Q9Y697 457 aa15.53■□□□□ 0.08
SSBP1-214ENST00000498107 IGHV5-10-1A0A0J9YXX1 117 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 OR6C74A6NCV1 312 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 ZNF839A8K0R7 811 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 HGSO14964 777 aaPredicted RBP15.52■□□□□ 0.08
SSBP1-214ENST00000498107 SLC16A5O15375 505 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 CAPN5O15484 640 aaPredicted RBP15.52■□□□□ 0.08
SSBP1-214ENST00000498107 KRT38O76015 456 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 C9P02748 559 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 THRAP10827 490 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 ZNF37AP17032 561 aaPredicted RBP15.52■□□□□ 0.08
SSBP1-214ENST00000498107 CYP2A7P20853 494 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 CNTFP26441 200 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 CRABP2P29373 138 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 CSF2RBP32927 897 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 HSD17B2P37059 387 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 EFTUD2Q15029 972 aaKnown RBP eCLIP15.52■□□□□ 0.084e-17■□□□□ 11.1
SSBP1-214ENST00000498107 IRGCQ6NXR0 463 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 CYHR1Q6ZMK1 362 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 PIWIL4Q7Z3Z4 852 aaKnown RBP15.52■□□□□ 0.08
SSBP1-214ENST00000498107 MCOLN3Q8TDD5 553 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 SLC44A1Q8WWI5 657 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 JPH3Q8WXH2 748 aaPredicted RBP15.52■□□□□ 0.08
SSBP1-214ENST00000498107 MRRFQ96E11 262 aaKnown RBP15.52■□□□□ 0.08
SSBP1-214ENST00000498107 CMKLR1Q99788 373 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 TRIM54Q9BYV2 358 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 GPAMQ9HCL2 828 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 SPATA7Q9P0W8 599 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.52■□□□□ 0.08
SSBP1-214ENST00000498107 TSR3Q9UJK0 312 aaKnown RBP15.52■□□□□ 0.08
SSBP1-214ENST00000498107 WASF3Q9UPY6 502 aa15.52■□□□□ 0.08
SSBP1-214ENST00000498107 V9GYY5 206 aaPredicted RBP15.52■□□□□ 0.08
SSBP1-214ENST00000498107 CCDC187A0A096LP49 1063 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 MED19A0JLT2 244 aaPredicted RBP15.51■□□□□ 0.07
SSBP1-214ENST00000498107 FAM149AA5PLN7 773 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 C2orf74A8MZ97 194 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 POC1B-GALNT4F8VUJ3 575 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 GFYI3L273 518 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 RASGRF2O14827 1237 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 HIST1H2AGP0C0S8 130 aaPredicted RBP15.51■□□□□ 0.07
SSBP1-214ENST00000498107 ANKRD34CP0C6C1 535 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 HOXB3P14651 431 aaPredicted RBP15.51■□□□□ 0.07
SSBP1-214ENST00000498107 HIST1H2ADP20671 130 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 BDKRB1P46663 353 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 PDX1P52945 283 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 CLDN6P56747 220 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 RAB10P61026 200 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 CFHR1Q03591 330 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 SLC29A2Q14542 456 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 ARHGAP19Q14CB8 494 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 ZNF574Q6ZN55 896 aaPredicted RBP15.51■□□□□ 0.07
SSBP1-214ENST00000498107 OR9A1PQ8NGU1 263 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 WDR36Q8NI36 951 aaKnown RBP15.51■□□□□ 0.07
SSBP1-214ENST00000498107 UBLCP1Q8WVY7 318 aaPredicted RBP15.51■□□□□ 0.07
SSBP1-214ENST00000498107 SLC22A18Q96BI1 424 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 HIST1H2AHQ96KK5 128 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 CCDC74BQ96LY2 380 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 TGM7Q96PF1 710 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 PAFAH2Q99487 392 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 HIST1H2AJQ99878 128 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 H2AFJQ9BTM1 129 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 SEMA6CQ9H3T2 930 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 PPCSQ9HAB8 311 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 FETUBQ9UGM5 382 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 ZNF180Q9UJW8 692 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 KLK13Q9UKR3 277 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 ICKQ9UPZ9 632 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 RUVBL2Q9Y230 463 aaKnown RBP15.51■□□□□ 0.07
SSBP1-214ENST00000498107 NCOR2Q9Y618 2525 aa15.51■□□□□ 0.07
SSBP1-214ENST00000498107 PIPSLA2A3N6 862 aa15.5■□□□□ 0.07
SSBP1-214ENST00000498107 GSAPA4D1B5 854 aa15.5■□□□□ 0.07
SSBP1-214ENST00000498107 TLCD2A6NGC4 264 aa15.5■□□□□ 0.07
SSBP1-214ENST00000498107 ARHGEF33A8MVX0 844 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms