RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 AFF3P51826 1226 aaKnown RBP12.42□□□□□ -0.42
TRAF4-208ENST00000469529 NXPH1P58417 271 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 ZXDCQ2QGD7 858 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-208ENST00000469529 ARL13AQ5H913 290 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-208ENST00000469529 CFAP157Q5JU67 520 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 TSSK4Q6SA08 328 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 ATG14Q6ZNE5 492 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 ZCCHC23Q6ZST2 131 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 NRROSQ86YC3 692 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 CRLF3Q8IUI8 442 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 ANKS4BQ8N8V4 417 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 OR9A1PQ8NGU1 263 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 OR56A3Q8NH54 315 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 OR5K2Q8NHB8 316 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 PPP4R1Q8TF05 950 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 TSACCQ96A04 125 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-208ENST00000469529 PDXPQ96GD0 296 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 FAR2Q96K12 515 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 INSM2Q96T92 566 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-208ENST00000469529 GSDMCQ9BYG8 508 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 SLC32A1Q9H598 525 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 AASDHPPTQ9NRN7 309 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 FGFR1OP2Q9NVK5 253 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 ZSCAN32Q9NX65 697 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-208ENST00000469529 PCTPQ9UKL6 214 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 HEBP2Q9Y5Z4 205 aa12.42□□□□□ -0.42
TRAF4-208ENST00000469529 ZFHX2Q9C0A1 2572 aaPredicted RBP12.42□□□□□ -0.42
TRAF4-208ENST00000469529 PLXND1Q9Y4D7 1925 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 PABPN1LA6NDY0 278 aaKnown RBP12.41□□□□□ -0.42
TRAF4-208ENST00000469529 HRO43593 1189 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 SUPT7LO94864 414 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 SLC35G4P0C7Q5 338 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 ERGP11308 486 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 ALOX15P16050 662 aaPredicted RBP12.41□□□□□ -0.42
TRAF4-208ENST00000469529 XRCC1P18887 633 aaPredicted RBP12.41□□□□□ -0.42
TRAF4-208ENST00000469529 RPL14P50914 215 aaKnown RBP12.41□□□□□ -0.42
TRAF4-208ENST00000469529 CLCQ05315 142 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 ILF3Q12906 894 aaKnown RBP eCLIP12.41□□□□□ -0.42
TRAF4-208ENST00000469529 LCP2Q13094 533 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 E2F2Q14209 437 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 GRB7Q14451 532 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 PLK5Q496M5 336 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.41□□□□□ -0.42
TRAF4-208ENST00000469529 SPATS2Q86XZ4 545 aaKnown RBP12.41□□□□□ -0.42
TRAF4-208ENST00000469529 DCUN1D3Q8IWE4 304 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 TMEFF1Q8IYR6 380 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 CCNYL1Q8N7R7 359 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 HMGCLL1Q8TB92 370 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 BCAS4Q8TDM0 211 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 SETD7Q8WTS6 366 aaKnown RBP12.41□□□□□ -0.42
TRAF4-208ENST00000469529 SKA2Q8WVK7 121 aaPredicted RBP12.41□□□□□ -0.42
TRAF4-208ENST00000469529 RMDN2Q96LZ7 410 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 PKP4Q99569 1192 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 NTMT1Q9BV86 223 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 TRIM55Q9BYV6 548 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 TWSG1Q9GZX9 223 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 TMEM168Q9H0V1 697 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 TRIT1Q9H3H1 467 aaKnown RBP12.41□□□□□ -0.42
TRAF4-208ENST00000469529 UTP6Q9NYH9 597 aaKnown RBP12.41□□□□□ -0.42
TRAF4-208ENST00000469529 KLHL14Q9P2G3 628 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 VTI1BQ9UEU0 232 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 SUSD2Q9UGT4 822 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 WDR37Q9Y2I8 494 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 PLEKHM1Q9Y4G2 1056 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 PCDHGA2Q9Y5H1 932 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 SLCO1B1Q9Y6L6 691 aa12.41□□□□□ -0.42
TRAF4-208ENST00000469529 FANCMQ8IYD8 2048 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 A0A1B0GTW7 788 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 ZNF839A8K0R7 811 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 K7EPI3 171 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 ZNF195O14628 629 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 SIX3O95343 332 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-208ENST00000469529 ESRRBO95718 433 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 HSPA4LO95757 839 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 TROVE2P10155 538 aaKnown RBP eCLIP12.4□□□□□ -0.42
TRAF4-208ENST00000469529 GNSP15586 552 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 MAOBP27338 520 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 EEF1DP29692 281 aaKnown RBP12.4□□□□□ -0.42
TRAF4-208ENST00000469529 PBLDP30039 288 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-208ENST00000469529 PKNOX1P55347 436 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 CDC16Q13042 620 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 CLCA4Q14CN2 919 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 TEAD4Q15561 434 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 RPE65Q16518 533 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 CYP2A13Q16696 494 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 GKAP1Q5VSY0 366 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-208ENST00000469529 LYSMD4Q5XG99 296 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 CGB2Q6NT52 195 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 IYDQ6PHW0 289 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 RNF165Q6ZSG1 346 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 FAM47EQ6ZV65 393 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 LRRC70Q7Z2Q7 622 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 HID1Q8IV36 788 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 WDR75Q8IWA0 830 aaKnown RBP12.4□□□□□ -0.42
TRAF4-208ENST00000469529 LRRC56Q8IYG6 542 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-208ENST00000469529 PHACTR4Q8IZ21 702 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 CLYBLQ8N0X4 340 aa12.4□□□□□ -0.42
TRAF4-208ENST00000469529 SPDYE1Q8NFV5 336 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms