RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 PRKG2Q13237 762 aa16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 PRKD1Q15139 912 aaPredicted RBP16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 SLC1A5Q15758 541 aa16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 LINC00696Q6ZRV3 163 aa16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 COX15Q7KZN9 410 aa16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 DNAJC22Q8N4W6 341 aa16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 NR4A3Q92570 626 aa16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 HGH1Q9BTY7 390 aa16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 EPS8L2Q9H6S3 715 aa16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 COG4Q9H9E3 785 aa16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 SPHK1Q9NYA1 384 aa16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 HACD3Q9P035 362 aa16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 CDC23Q9UJX2 597 aa16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 NENFQ9UMX5 172 aa16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 PKP3Q9Y446 797 aa16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 ARL5AQ9Y689 179 aa16.54■□□□□ 0.24
UBE2D4-209ENST00000454428 CACNA1CQ13936 2221 aa16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 C19orf84I3L1E1 186 aa16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 ONECUT2O95948 504 aa16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 TPBGLP0DKB5 382 aa16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 NFKB1P19838 968 aa16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 XIAPP98170 497 aa16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 SRSF11Q05519 484 aaKnown RBP16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 MFAP5Q13361 173 aa16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 BOP1Q14137 746 aaKnown RBP16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 CDSNQ15517 529 aa16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 NKG7Q16617 165 aa16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 TLDC1Q6P9B6 456 aa16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 SARM1Q6SZW1 724 aa16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 ISLR2Q6UXK2 745 aa16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 OR1N1Q8NGS0 311 aa16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 N4BP2L2Q92802 583 aaPredicted RBP16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 THOC3Q96J01 351 aaKnown RBP16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 ASB8Q9H765 288 aa16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 MVB12BQ9H7P6 319 aa16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 TXLNGQ9NUQ3 528 aa16.53■□□□□ 0.24
UBE2D4-209ENST00000454428 TRGV8A0A0C4DH27 118 aa16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 C17orf113A0A1B0GUU1 675 aa16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 LRRD1A4D1F6 860 aa16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 APOL1O14791 398 aa16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 PPP1R12AO14974 1030 aaPredicted RBP16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 PRICKLE3O43900 615 aaPredicted RBP16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 SRP72O76094 671 aaKnown RBP16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 CA7P43166 264 aa16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 CD151P48509 253 aa16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 UNC5AQ6ZN44 842 aa16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 MICALCLQ6ZW33 695 aa16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 OVCH1Q7RTY7 1134 aa16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 OR11G2Q8NGC1 345 aa16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 FKBP10Q96AY3 582 aa16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 LMF1Q96S06 567 aa16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 SLC26A1Q9H2B4 701 aa16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 WDR54Q9H977 334 aa16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 ANO10Q9NW15 660 aa16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 FKBPLQ9UIM3 349 aa16.52■□□□□ 0.24
UBE2D4-209ENST00000454428 CCL21O00585 134 aa16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 STX7O15400 261 aaKnown RBP16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 WISP2O76076 250 aa16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 MST1P26927 711 aa16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 PEBP1P30086 187 aaKnown RBP16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 ADORA2A-AS1P86434 159 aa16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 STX1AQ16623 288 aa16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 TUBB8Q3ZCM7 444 aa16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 VWA2Q5GFL6 755 aa16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 ALKBH5Q6P6C2 394 aaKnown RBP16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 GFRALQ6UXV0 394 aa16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 SHISA6Q6ZSJ9 500 aa16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 FAM20CQ8IXL6 584 aa16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 TFGQ92734 400 aaPredicted RBP16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 MAGEB10Q96LZ2 347 aaPredicted RBP16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 NAP1L5Q96NT1 182 aaPredicted RBP16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 NDC1Q9BTX1 674 aa16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 SAE1Q9UBE0 346 aaPredicted RBP16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 SUCOQ9UBS9 1254 aaKnown RBP16.51■□□□□ 0.23
UBE2D4-209ENST00000454428 A0A0J9YY10 115 aa16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 DIAPH2O60879 1101 aa16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 UNC5CO95185 931 aa16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 CHRM5P08912 532 aaPredicted RBP16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 ALAS2P22557 587 aa16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 IRAK1BP1Q5VVH5 260 aa16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 RPTNQ6XPR3 784 aa16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 VSIG1Q86XK7 387 aa16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 IPMKQ8NFU5 416 aa16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 OR4K2Q8NGD2 314 aa16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 OR5AR1Q8NGP9 310 aa16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 PSMF1Q92530 271 aa16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 FCRL5Q96RD9 977 aa16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 SOX17Q9H6I2 414 aaPredicted RBP16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 LMBRD1Q9NUN5 540 aa16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 EURLQ9NYK6 297 aa16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 PLA2G3Q9NZ20 509 aa16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 CTSFQ9UBX1 484 aa16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 CPAMD8Q8IZJ3 1885 aa16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 VPS13CQ709C8 3753 aa16.5■□□□□ 0.23
UBE2D4-209ENST00000454428 A0A1B0GX78 115 aa16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 IFRD1O00458 451 aaPredicted RBP16.49■□□□□ 0.23
UBE2D4-209ENST00000454428 KCNN4O15554 427 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms