RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 C1QTNF8P60827 252 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 ELAVL3Q14576 367 aaKnown RBP13.74□□□□□ -0.21
SCAF4-202ENST00000399804 C6orf136Q5SQH8 315 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 AGTRAPQ6RW13 159 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 TMEM26Q6ZUK4 368 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 OR10G6Q8NH81 332 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 SPPL3Q8TCT6 385 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 OTULINQ96BN8 352 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 LRRC58Q96CX6 371 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 RMND5BQ96G75 393 aaPredicted RBP13.74□□□□□ -0.21
SCAF4-202ENST00000399804 ZNF382Q96SR6 550 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 NLNQ9BYT8 704 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 WDR26Q9H7D7 661 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 IMPAD1Q9NX62 359 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 MAGEL2Q9UJ55 1249 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 SLC27A6Q9Y2P4 619 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 PPP6CO00743 305 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 KIAA0355O15063 1070 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 TNFAIP8O95379 198 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 PAK4O96013 591 aaPredicted RBP13.73□□□□□ -0.21
SCAF4-202ENST00000399804 RPL10P27635 214 aaKnown RBP13.73□□□□□ -0.21
SCAF4-202ENST00000399804 PPP2R1BP30154 601 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 CHSY3Q70JA7 882 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 ZC3H7AQ8IWR0 971 aaKnown RBP13.73□□□□□ -0.21
SCAF4-202ENST00000399804 ADHFE1Q8IWW8 467 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 COL26A1Q96A83 441 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 SCN3BQ9NY72 215 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 AQP1P29972 269 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 C2orf80Q0P641 193 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 ITPRIPL2Q3MIP1 535 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.73□□□□□ -0.219e-7■■■□□ 16.3
SCAF4-202ENST00000399804 ADCY4Q8NFM4 1077 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 PHOSPHO2Q8TCD6 241 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 RHBGQ9H310 441 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 TMCC3Q9ULS5 477 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 KAT7O95251 611 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 IRS1P35568 1242 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 GSSP48637 474 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 ERN2Q76MJ5 926 aaKnown RBP13.73□□□□□ -0.21
SCAF4-202ENST00000399804 R3HCC1LQ7Z5L2 792 aaKnown RBP13.73□□□□□ -0.21
SCAF4-202ENST00000399804 CLEC14AQ86T13 490 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 FATE1Q969F0 183 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 SIPA1Q96FS4 1042 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 C12orf66Q96MD2 445 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 ITM2BQ9Y287 266 aa13.73□□□□□ -0.21
SCAF4-202ENST00000399804 PRAMEF12O95522 483 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 CST1P01037 141 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 MMP2P08253 660 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 MYOGP15173 224 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 ATP6V1E1P36543 226 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 SSR2P43308 183 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 GRSF1Q12849 480 aaKnown RBP eCLIP13.72□□□□□ -0.21
SCAF4-202ENST00000399804 C18orf21Q32NC0 220 aaPredicted RBP13.72□□□□□ -0.21
SCAF4-202ENST00000399804 LRRC70Q7Z2Q7 622 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 PROSER1Q86XN7 944 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 RGL4Q8IZJ4 473 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 GLB1L3Q8NCI6 653 aaPredicted RBP13.72□□□□□ -0.21
SCAF4-202ENST00000399804 LRTOMTQ8WZ04 291 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 TEX12Q9BXU0 123 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 MIR1-1HGQ9H1L0 117 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 TRIT1Q9H3H1 467 aaKnown RBP13.72□□□□□ -0.21
SCAF4-202ENST00000399804 DZANK1Q9NVP4 752 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 GSAPA4D1B5 854 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 PLK4O00444 970 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 IL6P05231 212 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 EBLN1P0CF75 366 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 ARSAP15289 507 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 RPL3P39023 403 aaKnown RBP13.72□□□□□ -0.21
SCAF4-202ENST00000399804 ASMTP46597 345 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 IL5RAQ01344 420 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 C11orf74Q86VG3 221 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 TBC1D21Q8IYX1 336 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 ZNF614Q8N883 585 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 SH3GL3Q99963 347 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 NKX2-4Q9H2Z4 354 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 GSTO2Q9H4Y5 243 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 OAS3Q9Y6K5 1087 aaKnown RBP13.72□□□□□ -0.21
SCAF4-202ENST00000399804 ELOVL7A1L3X0 281 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 SAP18O00422 153 aaKnown RBP13.72□□□□□ -0.21
SCAF4-202ENST00000399804 MANBAO00462 879 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 NELFEP18615 380 aaKnown RBP13.72□□□□□ -0.21
SCAF4-202ENST00000399804 CCR3P51677 355 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 CLCNKAP51800 687 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 EIF4HQ15056 248 aaKnown RBP13.72□□□□□ -0.21
SCAF4-202ENST00000399804 CCNYL2Q5T2Q4 361 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 ANXA8L1Q5VT79 327 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 CCDC81Q6ZN84 652 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 THOC6Q86W42 341 aaKnown RBP13.72□□□□□ -0.21
SCAF4-202ENST00000399804 PIH1D2Q8WWB5 315 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 TFGQ92734 400 aaPredicted RBP13.72□□□□□ -0.21
SCAF4-202ENST00000399804 PLEKHG4BQ96PX9 1271 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 VPS29Q9UBQ0 182 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 ENTPD4Q9Y227 616 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 RUVBL1Q9Y265 456 aaKnown RBP13.72□□□□□ -0.21
SCAF4-202ENST00000399804 U3KQV3 271 aa13.72□□□□□ -0.21
SCAF4-202ENST00000399804 A0A1W2PP18 115 aa13.71□□□□□ -0.21
SCAF4-202ENST00000399804 FPGTO14772 594 aa13.71□□□□□ -0.21
SCAF4-202ENST00000399804 RASGRP1O95267 797 aa13.71□□□□□ -0.21
SCAF4-202ENST00000399804 RUNX3Q13761 415 aa13.71□□□□□ -0.21
SCAF4-202ENST00000399804 AFMIDQ63HM1 303 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms